Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1042 ATGGAGAACAGATCAAGTGTTTTAATGGGAAGATATGAATTAGGAAGATTGCTAGGCCAAGGTACCTTTGCAAAAGTTTACTATGCACGAAGCACCTCAACTAATCAGAGTGTGGCTGTTAAGGTAATTGACAAAGATAAGGTTCTGAAATCTGGGCAAGCTGAACACATCAAGCGTGAAATATCTATTATGAGGAAGGTTAGACATCCCTATATTATACAGCTTTTTGAGGTTATGGCCACCAAGAGTAAGATTTACTTTGTTATGGAATATGCTAAAGGCGGTGAACTCTTCACCAAGTTAGCTAAAAATGGAAAGCTCAAAGAGGAGGTTGCACATAAATATTTCTGGCAGCTGATCAATGCAGTTGAATTTTGTCACAGCAGAGGCGTGTACCACCGGGATATTAAACCAGAGAACCTTTTGTTGGATGAAAATCGGAATCTGAAGGTTTCTGATTTTGGGTTAAGTGCTCTGGTGGAATCCAAGTGGGAAGATGGCCTGCTGCATACAACTTGTGGCACACCCGCGTATGTTGCTCCTGAAGTCATCAAAAGGAAAGGGTATGATGGAGCCAAAGCTGATGTTTGGTGTTGTGGGGTAGTATTGTTTGTATTATTGGCAGGTTATCTCCCTTTTCATGATCCAAATTTGGTAGAGATGTATAGGAAGATTGGCAAAGCAGAATTTGAATGTCCTAACTGGTTCTCCCCAGAAGTTCGCAAACTTTTAAGCAAGATGTTAGATCCAGATCCCGATACTAGGATTTCCATGGAAAAGATTAGGAAGTGTTCTTGGTTTAAGAAAGGACCAGATTCCAAACATAAAAAATCTGTTGTGGAAAAGAAGGCTGTCTCTTCATCAGGTAAAAATCCTTCCGATCAAAGTGATGAAGCAGAAGCAAAGCAGGAGTCAGTTGTACCAATCAGTATCAATGCATTTGATATCATATCCCTTTCTTCTGGTTTTGATCTTTCTGGATTCTTTGAAGACAGTTTTAAGAAGAGAGAAGCTAGATTTACCTCAAGACAATCTGCACCGGTTATCATCTCGAAGCTGGAAGAAACTGCTAAGCGTCTGAAGATGAAAATAAAGAAAAAAGCCGCAGGTTTGTTAAAGCTAGAGGGCCACAAAGCAGGCAGAAAGGGTATTTTGTCCATTGATGCAGAGATCTTTGAGGTTACTCCGTATTTCCATCTGGTGGAGGTGAAAAAATCAGATGGAGATACATTGGAATTTCAGAAAATACTGAAAGAAGGTATACGGCCTGCCCTTCAGGATATTGTCTGGGTTTGGCAAGGTGATGACCAAGAACAGCAATCACAGCAACAACTGCAGATACATGATCCGCAGCCATCACAGCAATGA 1368 0.4079 MENRSSVLMGRYELGRLLGQGTFAKVYYARSTSTNQSVAVKVIDKDKVLKSGQAEHIKREISIMRKVRHPYIIQLFEVMATKSKIYFVMEYAKGGELFTKLAKNGKLKEEVAHKYFWQLINAVEFCHSRGVYHRDIKPENLLLDENRNLKVSDFGLSALVESKWEDGLLHTTCGTPAYVAPEVIKRKGYDGAKADVWCCGVVLFVLLAGYLPFHDPNLVEMYRKIGKAEFECPNWFSPEVRKLLSKMLDPDPDTRISMEKIRKCSWFKKGPDSKHKKSVVEKKAVSSSGKNPSDQSDEAEAKQESVVPISINAFDIISLSSGFDLSGFFEDSFKKREARFTSRQSAPVIISKLEETAKRLKMKIKKKAAGLLKLEGHKAGRKGILSIDAEIFEVTPYFHLVEVKKSDGDTLEFQKILKEGIRPALQDIVWVWQGDDQEQQSQQQLQIHDPQPSQQ 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1042 455 FunFam Non-specific serine/threonine protein kinase 306 430 - -
Lele02g1042 455 Gene3D Transferase(Phosphotransferase) domain 1 3 313 - -
Lele02g1042 455 ProSiteProfiles Protein kinase domain profile. 12 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele02g1042 455 Pfam Protein kinase domain 12 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele02g1042 455 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
Lele02g1042 455 SUPERFAMILY Protein kinase-like (PK-like) 8 298 IPR011009 -
Lele02g1042 455 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Lele02g1042 455 CDD STKc_SnRK3 11 266 - -
Lele02g1042 455 MobiDBLite consensus disorder prediction 269 302 - -
Lele02g1042 455 SMART serkin_6 12 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele02g1042 455 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Lele02g1042 455 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 5 423 - -
Lele02g1042 455 Gene3D Kinase associated domain 1, KA1 314 431 - -
Lele02g1042 455 FunFam Non-specific serine/threonine protein kinase 2 293 - -
Lele02g1042 455 MobiDBLite consensus disorder prediction 269 283 - -
Lele02g1042 455 ProSiteProfiles NAF domain profile. 306 330 IPR018451 GO:0007165
Lele02g1042 455 CDD CIPK_C 312 426 - -
Lele02g1042 455 Pfam NAF domain 308 366 IPR004041 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1042 Lele-ChrLele02 6415764 6417131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1042 1 441 CBL-interacting serine-threonine protein kinases AT5G58380 65.721 0.0 623
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele02g1042 Pkinase 8.1e-77 CL0016