Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1040 ATGATATTGACCAACTGTTCCTATTTATCTTGCCTTTTAAGCACTTCTCTCCCTGTTTCTCAGAAATACTTCCACACCTGTTTGTGTTTTTGCCTCAAAGAAAAGTTCTTCCTTCTTACAGCTCCAACACACAGATCAACACAATCAAGAGGCATGCTTGGATGTCCAGAAACAGAAAGAGCAGAAGAGATAGCCAAGAACACAGCAGAGGCTGTAGAAGCTTCTTGTCAAATGGGAAGGAGGAATTTCTATGGACCAGAAGTTTCAGGGACAACCTTAAACACTGTAACTCCTTGTGCTGCATGTAAGCTTCTGAGAAGAAGATGTGCTGAAGAATGCCCCTTCTCTCCTTACTTTTCCCCCCATGAGCCTCAGAAGTTCGCTGCTGTTCATAAAGTGTTTGGTGCAAGCAATATCGCCAAGATGCTAATGGAGGTTCCTGAGAGCCAAAGAGCAGATGCTGCAAACAGTCTGTTTTATGAAGCTAACCTGAGGCTGAGGGACCCAGTTTATGGATGCATGGGTGCAATATCAGCTTTGCAGCAACAAGTTCAGTCATTACAAGCAGAGCTGAATGCTTTAAGATCTGAGATTCTGAAGTACAAGTACAGAGAAGCTGCAAGTCAGATCATTTCTTCTCATGGTGGGGCTTTGGTTTCTTCTGTGGAGGATCCTATTTCTGCAGAATCACAAGAAGGTCTTGTTCATCAACCTCAACCTTCTCCTCCTCCAAAACCATCATTACCTTCTGCTTCTGTTAATGTTCTTTCAACCCTGTCTTCATCTTCCAGTTCTTCCGTATACACGCCCCCTAAGAGCACAATCATCCATGGATCTATCTCCAGCGAAAATGTCCCTTACTTTGTTTAA 870 0.4345 MILTNCSYLSCLLSTSLPVSQKYFHTCLCFCLKEKFFLLTAPTHRSTQSRGMLGCPETERAEEIAKNTAEAVEASCQMGRRNFYGPEVSGTTLNTVTPCAACKLLRRRCAEECPFSPYFSPHEPQKFAAVHKVFGASNIAKMLMEVPESQRADAANSLFYEANLRLRDPVYGCMGAISALQQQVQSLQAELNALRSEILKYKYREAASQIISSHGGALVSSVEDPISAESQEGLVHQPQPSPPPKPSLPSASVNVLSTLSSSSSSSVYTPPKSTIIHGSISSENVPYFV 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1040 289 Coils Coil 177 204 - -
Lele02g1040 289 ProSiteProfiles LOB domain profile. 97 198 IPR004883 -
Lele02g1040 289 MobiDBLite consensus disorder prediction 231 253 - -
Lele02g1040 289 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 94 242 - -
Lele02g1040 289 Pfam Lateral organ boundaries (LOB) domain 98 195 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1040 Lele-ChrLele02 6406151 6407342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1040 59 208 AS2 family AT2G30340 71.053 2.64e-71 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele02g1040 LOB 1.4e-40 No_clan