Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1037 ATGCTTGAATCGATGACAAAAAATGACAATGGGAAAGCTGAAAACGAGAATAAAGAAAGAACCAAACCAAATGGCCTTCTCGCTTTACAGCTCATCGTGTCTTCGCTTTTAGGGTGTCTCCTCTTCAATTATCCGGTGGTTCCTAAAGATAGCTTCTTTCTCATAGCCTTTCGGTGGGGTGTTATGGAGATATCCTTGTTGAAGATGCTTGTTAATGGCATATCCTCATTTTCGCATCTATCTTTTTCTGGGAATGGGAACTCAGAATTTGTTACGAAATATTACCAAAAGGTGGAGGAGACACTCAAGTTGCTCAAGCCTATAGCTGACGCTTTGGTTAATTCTGAATTAGCTTATGATGAAGTTCTTAACAAAGCTTTTGAAGAAGTGGGTCGGGCTGTTGAAGAGTTGAGGGAGCTTTTTGGGAATTGGCATCGCTTGTCTAGCAAAATTTACTTTATTATGCAAGTTGAATCCTTGCTATCCAGGATACAGACTTCAGCACTCAATATTTTCCAGCAGCTGAAGACTTCCCATCTAAATCTCGCAGACGAACTGACTACTGTACAAGTTGAGCATTGTGTTGAGAAACTTAAGCTTTTGGGACATGAGGAGGAAATCTTGTCAGTCATTAAAGAAACAATTAGCGAACAAGTAGAAGGTGCAGGACCTAGTTCAGAAGTCCTAGCAAACATTGCTGAGAGCTTGGGCCTGAAGTCTAACCAAGAGATTCTGATTGAGGCTGTAGCCCTTGAAAAGTTGAAGGAGATTGCTGAACAAGCTGAAAAAACTGCTGAAGCCGAGTACATTGATCAAATGATTACTCTTGTAACTCGTATGCATGAGCGTCTTGTTGCAGTTAAGCAGGCCCAGAGCTGTAGCCCAGTTGCAGTACCTCCTGATTTTTGCTGTCCTCTTTCTTTGGAGTTAATGATGGACCCAGTAATTGTGGCTTCAGGGCAAACTTATGAGCGGGCTTTCATCAAGAACTGGATTGATTTGGGACTTACCGTCTGTCCAAAGACACGTCAGACCTTGGCTCACACCAACTTAATACCTAACTACACTGTAAAGGCGTTGATTGCAAACTGGTGTGAATCAAACAATGTGAAGCCAGTTGATCCCGTAGTGTCCACAAACTTAAATCAGGCATCTTTTCTTCTCGGGTACGTTGAATCTGGTGCGATCAGGGAATCACCTGTTTTTGCTCATTCTAGGGCCAACCACCCATCCTACCCAGAGGCTGTTCGCTCCCATTCTTTCAGTTCACCAAGTAAAACATCTGGAGGAATTCCTAGAGAGGGAACATCACCATATCATCCTCGTTCAACTTCAGAAGGTTCCTTAAGGGGCATGGCTAATGAACAGTGTTTGGATTTTGCGAGAACATCACCTGCGGGTTCGGATGAAAGGAGTGAGGATTCAGTTGTCCAACCGTCAAGGTCTCAATCTATGACCGAACCGTCCAATGCCCATAGCTCTGAACAATCCCAAGCCCATGTTAGAGCAGCTTCTGATTCCAGTGCACTTTCCAGTGTTCAAGGAACACGAGGTGATGGTAACAGTACTCCTCAGCTGTCAACCACTCCTGGCAACAGTAAGGATGCTTCTGTGGGGGTAAATTCTGGGATAGATGCTAATGGTGCTGCAGCTAATGGTACTCCCCAGAGAGAACCTGAGATCTCAACCCGTGTGGAGACAAGGCCTCGAAACCCAAGTATATGGCGGCGGCCATCAGAAAGATTTGTTCCTAGGGTGTTGCCCTCTGCTGGTGAAACAAGAGCTGATCTTTCTGAAATTGAAGTCGAGGTTAAGAGCTTGGTTGAGGACTTGAAAAGCACTTCTGTTGATACTCAAATGGAGGCAACATCAAGGCTCCGCCTTCTTGCTAAGCACAATATGGATAATCGACTCGTGATTGCAAACTGTGGAGCCATTGACTTGTTGGTTGACTTGCTTAAATCATCTGATACAACAATCCAGGAAAATTCTGTTACAGCACTTCTGAACTTATCAATCAATGATAACAACAAAAGTGCAATTGCAAATGCTGGTGCAATTGATCCTCTAATCCATGTGCTTGAGACAGGAAGCCCTGAAGCCAAGGAGAATTCAGCTGCCACTCTCTTCAGCTTATCAGTGATTGAAGAAAACAAGATTGAGATAGGGAGGTCTGGGGCAATTAGGCCTCTGGTTGATTTATTAGGTAATGGAACTCCAAGAGGAAAGAAAGATGCAGCCACCGCTCTGTTTAACTTGTCAATTTATCATGAAAACAAGGGCCGCATCGTGCAAGCCGGAGCCGTGAAGCACCTTGTGGAATTGATGGATCCAGCCGCTGGAATGGTTGACAAGGCAGTGGCTGTTTTAGCAAACCTTGCCACAATTCAAGAAGGAAGAACCGCCATTGGCACAGAAGGTGGGATCCCTGTTTTAGTCGAGGTTGTGGAGTTGGGCTCCGCGAGAGGAAAGGAGAATGCAGCCGCTGCTCTACTACATATTTGCTCAAACAATCCTCGATATTTGAGCACGGTGCTTCAAGAAGGAGCTGTCCCACCATTAGTAGCTTTGTCACAGTCAGGCACCCCAAGGGCCAAAGAAAAGGCCCAGGCTCTCCTCAACCAGATTAGAAATCAAAGACACAATGCTGGGAGAGGCTGA 2661 0.4506 MLESMTKNDNGKAENENKERTKPNGLLALQLIVSSLLGCLLFNYPVVPKDSFFLIAFRWGVMEISLLKMLVNGISSFSHLSFSGNGNSEFVTKYYQKVEETLKLLKPIADALVNSELAYDEVLNKAFEEVGRAVEELRELFGNWHRLSSKIYFIMQVESLLSRIQTSALNIFQQLKTSHLNLADELTTVQVEHCVEKLKLLGHEEEILSVIKETISEQVEGAGPSSEVLANIAESLGLKSNQEILIEAVALEKLKEIAEQAEKTAEAEYIDQMITLVTRMHERLVAVKQAQSCSPVAVPPDFCCPLSLELMMDPVIVASGQTYERAFIKNWIDLGLTVCPKTRQTLAHTNLIPNYTVKALIANWCESNNVKPVDPVVSTNLNQASFLLGYVESGAIRESPVFAHSRANHPSYPEAVRSHSFSSPSKTSGGIPREGTSPYHPRSTSEGSLRGMANEQCLDFARTSPAGSDERSEDSVVQPSRSQSMTEPSNAHSSEQSQAHVRAASDSSALSSVQGTRGDGNSTPQLSTTPGNSKDASVGVNSGIDANGAAANGTPQREPEISTRVETRPRNPSIWRRPSERFVPRVLPSAGETRADLSEIEVEVKSLVEDLKSTSVDTQMEATSRLRLLAKHNMDNRLVIANCGAIDLLVDLLKSSDTTIQENSVTALLNLSINDNNKSAIANAGAIDPLIHVLETGSPEAKENSAATLFSLSVIEENKIEIGRSGAIRPLVDLLGNGTPRGKKDAATALFNLSIYHENKGRIVQAGAVKHLVELMDPAAGMVDKAVAVLANLATIQEGRTAIGTEGGIPVLVEVVELGSARGKENAAAALLHICSNNPRYLSTVLQEGAVPPLVALSQSGTPRAKEKAQALLNQIRNQRHNAGRG 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1037 886 Coils Coil 248 271 - -
Lele02g1037 886 MobiDBLite consensus disorder prediction 470 540 - -
Lele02g1037 886 CDD RING-Ubox_PUB 302 344 IPR045210 -
Lele02g1037 886 PANTHER U BOX DOMAIN-CONTAINING 92 875 - -
Lele02g1037 886 SMART arm_5 756 795 IPR000225 GO:0005515
Lele02g1037 886 SMART arm_5 674 714 IPR000225 GO:0005515
Lele02g1037 886 SMART arm_5 796 836 IPR000225 GO:0005515
Lele02g1037 886 SMART arm_5 633 673 IPR000225 GO:0005515
Lele02g1037 886 SMART arm_5 715 755 IPR000225 GO:0005515
Lele02g1037 886 SMART arm_5 837 878 IPR000225 GO:0005515
Lele02g1037 886 Gene3D - 678 780 IPR011989 -
Lele02g1037 886 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 297 371 IPR013083 -
Lele02g1037 886 SMART Ubox_2 301 364 IPR003613 GO:0004842|GO:0016567
Lele02g1037 886 FunFam RING-type E3 ubiquitin transferase 588 882 - -
Lele02g1037 886 MobiDBLite consensus disorder prediction 463 576 - -
Lele02g1037 886 Gene3D - 781 885 IPR011989 -
Lele02g1037 886 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 726 768 IPR000225 GO:0005515
Lele02g1037 886 Pfam Armadillo/beta-catenin-like repeat 674 713 IPR000225 GO:0005515
Lele02g1037 886 Pfam Armadillo/beta-catenin-like repeat 717 754 IPR000225 GO:0005515
Lele02g1037 886 Pfam Armadillo/beta-catenin-like repeat 635 672 IPR000225 GO:0005515
Lele02g1037 886 SUPERFAMILY RING/U-box 291 374 - -
Lele02g1037 886 SUPERFAMILY ARM repeat 604 876 IPR016024 -
Lele02g1037 886 FunFam RING-type E3 ubiquitin transferase 297 372 - -
Lele02g1037 886 MobiDBLite consensus disorder prediction 561 575 - -
Lele02g1037 886 Pfam U-box domain 298 368 IPR003613 GO:0004842|GO:0016567
Lele02g1037 886 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 644 686 IPR000225 GO:0005515
Lele02g1037 886 MobiDBLite consensus disorder prediction 412 450 - -
Lele02g1037 886 ProSiteProfiles U-box domain profile. 297 371 IPR003613 GO:0004842|GO:0016567
Lele02g1037 886 Gene3D - 589 677 IPR011989 -
Lele02g1037 886 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 767 808 IPR000225 GO:0005515
Lele02g1037 886 MobiDBLite consensus disorder prediction 415 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1037 Lele-ChrLele02 6387539 6394112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1037 257 886 U-box Gene Family AT2G23140 61.215 0.0 697
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g1037 02 6387539 6394112 Lele03g1024 03 5929449 5936925 hybridization
Lele02g1037 02 6387539 6394112 Lele04g1027 04 6361131 6366894 hybridization