Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1029 ATGGCTTCAACTGCTCTTCAATGGCTAAGCCTTGTAGGCATGATTTGGCTCCAAGCCATAAATGGCACAAACACCAATTTCCCTGCCTACTCATCTCAACTGAAACAGCTTCTTTCAATTTCACAAGTGCAGCTCAACAACCTTGCTTTTGCCTCTGATGCAGGAAAACTTCTTGGCTGGTTCTCTGGCATGGCTTCTATTCACCTCCCTCTCTGGCTTGTTCTCCTGATCGGGTCAAGTCTTGGGTTGGTTGGTTATGGAATCCAATATCTCTTCATAACACAACAAATCTCATCTCTCTCCTACTGGCATGTCTTCTTACTAACTGTTCTTGCTGGGAATAGCATCTGTTGGATTAACACTGTCAGTTATGTCATCACCATTAGGAACTTCCCATCCGATCACCAAGTCGCCGTAGGGTTAACAACTAGTTATCAAGGGTTAAGTGCAAAGATCTATACTGATATTGTTCAAGTTCTTTCTCCCAGTAAGAAAGCTAGAGCGTTTCTTTTCTTGAACTCTGTGTTGCCTCTCATAGTGAGCCTCATAGCAACTCCTGTAACTAGAGAAATTCAAGTCACAAGGCCTAAACGAATGCGTTTTGGACTTGTTGTAATGTTTGTTATTACAATTTCCACTGGTGTATATGCTGTTCTTAGCAGCTTGCAGTTTTTGTCTCGCAAATTATCTCCATTGAGTAATCTGATTGGTATTCTAGTGGCCCTTTTCCTCCCTCTATTACTTCCAGTCTCAGAGAAGTTCAACGAATTGGTTAGATCATGGCAAGCCAATCGAGAAAGACTACGAATCTATCACTTCACAGTGGAGGAAAATAACAGTCCTAATGGAGAGAGGACAGAGATCAGTGAGCCAAAAGATGGAGAAGAGGAAGAAGAAGAAGAAGATAGCAACAGAGAGGCTCAAGAACTTGTTGTCAGAGAAGAAATTGGAGTGAAGTTAATGCTGAGGAGAATAGATTTCTGGTTATATTTTTTAATATATTTCTTCGGTGCAACAATTGGTTTAGTCTTTATGAACAACTTAGGACAAATTGCAGAGTCCAGAGGCAACTCCAATACTTCATCTCTGGTATCCTTGTCTTCATCTTTTGTGTTCTTTGGCCGTCTCATGCCATCTCTCATGGACTACTTCTGCAGGGGTAGGGTTAGGATTTCAAGGCCAGCGAGTATGGCGGCATTAATGGCGCCAACAGCAGGATCGTTCTTGTTGCTTCTCAACAGAACCGAGCTAGCTTTATACACTAGCACTGCCATAATAGGAGTATGCACTGGAGCCATAACTTCCATTTCTGTGTCCACGACCACTGAACTATTTGGGACAAAGAATTTCTCAGTGAACCACAACGTAGTTGTGGCCAACATTCCCATTGGTTCTTTTGCGTTTGGTTACTTGGCTGCTCTGATTTATCGTAAGGAACAAGATGGAGATGGGAAATGCATTGGTATGGAGTGTTATAGAAGAACTTTCATCATCTGGGGTTCGCTCTGTTTCTTTGGGACAGTGTTGGCTTTGATTCTTCATGCCAGAACTCGCAAGTTCTACTCGCAGAGATACAACAGATAG 1584 0.4249 MASTALQWLSLVGMIWLQAINGTNTNFPAYSSQLKQLLSISQVQLNNLAFASDAGKLLGWFSGMASIHLPLWLVLLIGSSLGLVGYGIQYLFITQQISSLSYWHVFLLTVLAGNSICWINTVSYVITIRNFPSDHQVAVGLTTSYQGLSAKIYTDIVQVLSPSKKARAFLFLNSVLPLIVSLIATPVTREIQVTRPKRMRFGLVVMFVITISTGVYAVLSSLQFLSRKLSPLSNLIGILVALFLPLLLPVSEKFNELVRSWQANRERLRIYHFTVEENNSPNGERTEISEPKDGEEEEEEEDSNREAQELVVREEIGVKLMLRRIDFWLYFLIYFFGATIGLVFMNNLGQIAESRGNSNTSSLVSLSSSFVFFGRLMPSLMDYFCRGRVRISRPASMAALMAPTAGSFLLLLNRTELALYTSTAIIGVCTGAITSISVSTTTELFGTKNFSVNHNVVVANIPIGSFAFGYLAALIYRKEQDGDGKCIGMECYRRTFIIWGSLCFFGTVLALILHARTRKFYSQRYNR 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1029 527 Pfam Nodulin-like 7 250 IPR010658 -
Lele02g1029 527 SUPERFAMILY MFS general substrate transporter 23 520 IPR036259 -
Lele02g1029 527 MobiDBLite consensus disorder prediction 279 306 - -
Lele02g1029 527 MobiDBLite consensus disorder prediction 291 305 - -
Lele02g1029 527 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 522 - -
Lele02g1029 527 Gene3D MFS general substrate transporter like domains 273 519 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1029 Lele-ChrLele02 6329334 6331145 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1029 1 524 Nodulin-like Gene Family AT2G30300 47.477 1.16e-153 447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g1029 02 6329334 6331145 Lele02g1029 02 6329334 6331145 ECH
Lele02g1029 02 6329334 6331145 Lele03g1015 03 5877140 5878952 hybridization
Lele02g1029 02 6329334 6331145 Lele04g1017 04 6300975 6302786 hybridization