Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1020 ATGGCATCTTCTTCGGGAAGCCTTGACACTTCTGGTAACTCCCACCCCGCCTTCACTTTCTCTACGCATCCATTCATGAATACCTCCTTCTCCGAACTTCTCGCTTCTCCTCCTGCCGCCGCCGGTAACCCCGCCTCCGCCGTCGATAAACCGCGCGGATTGTCGGATCGTATCGCGGAGAGAACTGGGTCGGGTGTGCCCAAGTTCAAGTCGACCCCACCTCCTTCGCTGCCTCTCTCTCCTCCTGCCATTTCTCCTTCTTCTTACTTCGCCATCCCTGCTGGGTTGAGCCCCGCAGAGCTTCTCGACTCGCCTGTTCTCCTTAATGCTTCTAACATTTTGCCATCTCCGACAACTGGAGCATTCTCTGCTCAGGCCTTCAATTGGAAGAGCAGTTCTGGACAAAACCAGCAAAATATCAAAGAAGAGGACAAGAACTTCTCAAGTTTCTCGTTTCAACCCCAGGCCAGACCTCCTCTTCCGTCCACCACAACGTTTCAAAATTCAGCTGCCTCTAATCAAACTGCATGGAGTTTTGAAGCCAAGAAGCAAGATAACTTTTCTTCAGGAAAGAATATGGTGAAATCTGAGGACGCTTCTACACAGAGCTATTCTACTGAGATGGTAATCAGTAGTGTCCAAGCAAACCATAATTCTGGGTTTCAATCGGATCATAGCAACTACAAGCCACAACCTCAGACTTTAAGCAGAAGATCAGATGATGGGTATAACTGGAGAAAATATGGGCAGAAGCAAGTGAAAGGAAGTGAGAATCCTAGAAGCTACTATAAATGCACATACCCTAATTGCCCAACGAAGAAGAAGGTTGAGAGGTCTCTGGATGGGCAAATCACTGAGATAGTTTACAAGGGAACACATAACCACCCCAAGCCTCAGGCAACTAGGAGAAACTCATCAAATGCATCTTCTCTCGCAATTTATGCTTCAAATTCTGTTGCAGCTGACATCCCAGATCAGTCATTTGCCAGCCATGGTAATGGACAAATGGATTCAGCTGCAACACCTGAGAACTCGTCGATATCAATGGGAGATGATGATTTTGAGCAGACTTCCCAGAGGACTAGATCAGGAGGAGATGAGTTTGATGAAGACGAATCTGATGCCAAAAGATGGAAAATGGAGGGTGAAAATGAGGGTATATCGGCAGCTGGAAGCAGAACAGTAAGAGAACCCAGAGTCGTAGTCCAGACAACCAGTGACATAGATATTCTAGATGATGGATACAGATGGAGAAAATACGGGCAAAAAGTAGTGAAGGGAAATCCAAATCCAAGGAGTTACTACAAATGCACGCACCCAGCATGCCCAGTGAGGAAGCACGTAGAGAGAGCATCGCACGACCTAAGGGCAGTGATCACAACGTACGAGGGAAAGCATAACCATGATGTCCCTGCTGCGAGAGGGAGCGGCGGCAATTCTGTGAACAGACCTCTCTTAAACAATTCCACAAACACCAACGGTGCAATGACCACGGCCGTAAGGCCATCGGCCATCACACACAACACTAACACCTCTATTCAGAATTTTAGGGCCGGAGCGTCAGCACCACAAGGCCTAGGGATGCTTCAGGGTCCAATAAGCTTCGGGTTTTCAGGGTTTGGGAATTCAATGGGGACTTTCATGAATAATAATAATAATAATAATCAGCAGCAAGCACAACCTGAGAATGGGTTTTCTTCCAGAGCAAAGGAGGAGCCGAGGGATGACATGTTTCTTGAATCTCTACTGTGTTGA 1755 0.4746 MASSSGSLDTSGNSHPAFTFSTHPFMNTSFSELLASPPAAAGNPASAVDKPRGLSDRIAERTGSGVPKFKSTPPPSLPLSPPAISPSSYFAIPAGLSPAELLDSPVLLNASNILPSPTTGAFSAQAFNWKSSSGQNQQNIKEEDKNFSSFSFQPQARPPLPSTTTFQNSAASNQTAWSFEAKKQDNFSSGKNMVKSEDASTQSYSTEMVISSVQANHNSGFQSDHSNYKPQPQTLSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSLDGQITEIVYKGTHNHPKPQATRRNSSNASSLAIYASNSVAADIPDQSFASHGNGQMDSAATPENSSISMGDDDFEQTSQRTRSGGDEFDEDESDAKRWKMEGENEGISAAGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPACPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGGNSVNRPLLNNSTNTNGAMTTAVRPSAITHNTNTSIQNFRAGASAPQGLGMLQGPISFGFSGFGNSMGTFMNNNNNNNQQQAQPENGFSSRAKEEPRDDMFLESLLC 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1020 584 Pfam WRKY DNA -binding domain 240 296 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele02g1020 584 Pfam WRKY DNA -binding domain 412 468 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele02g1020 584 Gene3D WRKY domain 226 299 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele02g1020 584 FunFam WRKY transcription factor 229 299 - -
Lele02g1020 584 FunFam WRKY transcription factor 33 398 464 - -
Lele02g1020 584 MobiDBLite consensus disorder prediction 467 493 - -
Lele02g1020 584 ProSiteProfiles WRKY domain profile. 240 298 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele02g1020 584 Gene3D WRKY domain 398 464 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele02g1020 584 MobiDBLite consensus disorder prediction 546 565 - -
Lele02g1020 584 MobiDBLite consensus disorder prediction 217 244 - -
Lele02g1020 584 MobiDBLite consensus disorder prediction 546 577 - -
Lele02g1020 584 MobiDBLite consensus disorder prediction 217 239 - -
Lele02g1020 584 MobiDBLite consensus disorder prediction 36 83 - -
Lele02g1020 584 ProSiteProfiles WRKY domain profile. 406 471 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele02g1020 584 SUPERFAMILY WRKY DNA-binding domain 238 298 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele02g1020 584 MobiDBLite consensus disorder prediction 325 391 - -
Lele02g1020 584 MobiDBLite consensus disorder prediction 325 354 - -
Lele02g1020 584 MobiDBLite consensus disorder prediction 355 383 - -
Lele02g1020 584 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 102 519 IPR044810 GO:0003700
Lele02g1020 584 MobiDBLite consensus disorder prediction 150 171 - -
Lele02g1020 584 SUPERFAMILY WRKY DNA-binding domain 403 471 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele02g1020 584 SMART WRKY_cls 411 470 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele02g1020 584 SMART WRKY_cls 239 297 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1020 Lele-ChrLele02 6278325 6280944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1020 66 583 WRKY Transcription Factor Family AT2G38470 45.826 7.25e-115 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele02g1020 WRKY 5.6e-25 CL0274