Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0962 ATGGCTGAGTGGTTCTCTCTAGGTGGAAAACAAGCAGGCCCACCACCACAAACGAAGGTAGAAAAAGGAAAAGAAGATAACAGCAACAGCAATTGTCTATTCTTGCTGAGCGAGAAGGAGATCTACAGCAGCAGCAACAAGGGATTCGAGATATGGACACAGTCTTATCATTCATCAAACCAATCCTTGAGCAACGGCTTCTCTCTTGGGGTGGGTCCTACTTGTGCAAACTTGTTTGATGAGTCGACAAGGAATTTCAGTCTTGATGAAAACGAAATCTCACTCTCTAGAGACCCCTCATCTCTAGCTTTTCTTTTGCAACTCTTTCTTCTTTTCTATCTTCTCACTGTTTGGTTGGAACTGGGACAATTGCCTGGCGAACTGAACTCACCAGCAGTGTTTCAATGTGTGAGAGTTAACTCAATGGACACACCAGCAGAAGAACAGTACGCTTATCAAACCGCTGTTAACATAGGAGGGCATGTTTTCAAAGGAATCCTCTACGACCAAGGCCCTGATGCTCCTTATAAAGCAGGTGGTGATCGGAGCTCCTCCGGCGCCGCAGCTGATGCTGATCATCATCAAAATCTTAATCTCATAACGGCCTCAACCACGGCAGCTCCGGCTGCCAGAGCCAACCCGTTTGATCCTTCAATCTACCCTAATATTCCTCTTAATACTTTCATGGCTGGAGGTTCCCTGCCATTAATTGCCAACCACGAAGCTGTTCCAATATCTGTGCCGTACGCATGCATGTCAACAGCTGAGAAGCCATTTCTCGGATATGGAGAAAAGCCAGTTCCAACGGACATATGCTGCTCAGAGCTCGAAGCTGAGCTAATTGAGAATAATGATAAGTTGCAACATAGTTACAGTGAGCTATTAGAGTATAAACTCGTTCTGCAGAAGGTTGGTGAGTTTTTCTCTCCGGCCCAAAAAAGCGCAGCATCTCAACAGAGAGAACTTGGAGTTCAGAGCAATTCCGAAGGGTCTATTGACAGCCCATTACTACAGGAACAAGAGATGAGAACGGAAACATCAAAGCCAATTAAACTGGGCTTTATCGCTGGCCTAGTTCCAAGAGAAAAATCAATGTCTTTTGAAAGAATTTTATTTCGTCCTACTAGGGGTAACTTGTTTCTTAAGCAAGCCGTGATTGAACATCCTGTACTTGATCCTTTGTCAGGAGAGAAGGTTGATAAAAATGTGTTTCTTATCTTTTATTCTGGAGAAAGAGCTAATAGTAAAATTCTAAAAATATGCGATGCCTTTGGAGCAAATCGTTATCCTTTCACAGACGACTTGAGTATACAATTTGAGACGATTACAGAGGAATACTATATTGCAGACAATTGGATATCACTACTAGACGTGGAGCCTTCTGGTGAAGAAGGTAAAATTCATTTATCACACTTTGAATATGTTCAACATCCATGTGACAAAGAAATGTCTTGTCGCAGAAGATTCAAAGTGCATTGCAGCGAGCAAGCATGGACAGTAACTCACAAGTTGGGGCTATATTCCAGTCTTGCTCATTCAGAGCTATCAAGTGTATTCTATGACAAAGTTCTACTTCTGGCATGGGGGTATAAGAACATATTTGTTCTCATTATTGGTATTACTGTTCTCATATTCGCAACCGTTGGCGTGCTTCTGATAATGGAAACTTTAAGTGCGTTCTTGCACGCCTTGAGGCTTCACTGGATAGAGTTCCAGAACAAGTTTTACGAAGGAGATGGTTACAAGTTCTGCCCTTCATTTACTTCACTTCATGAAGAGGATGAATCATAG 1791 0.4266 MAEWFSLGGKQAGPPPQTKVEKGKEDNSNSNCLFLLSEKEIYSSSNKGFEIWTQSYHSSNQSLSNGFSLGVGPTCANLFDESTRNFSLDENEISLSRDPSSLAFLLQLFLLFYLLTVWLELGQLPGELNSPAVFQCVRVNSMDTPAEEQYAYQTAVNIGGHVFKGILYDQGPDAPYKAGGDRSSSGAAADADHHQNLNLITASTTAAPAARANPFDPSIYPNIPLNTFMAGGSLPLIANHEAVPISVPYACMSTAEKPFLGYGEKPVPTDICCSELEAELIENNDKLQHSYSELLEYKLVLQKVGEFFSPAQKSAASQQRELGVQSNSEGSIDSPLLQEQEMRTETSKPIKLGFIAGLVPREKSMSFERILFRPTRGNLFLKQAVIEHPVLDPLSGEKVDKNVFLIFYSGERANSKILKICDAFGANRYPFTDDLSIQFETITEEYYIADNWISLLDVEPSGEEGKIHLSHFEYVQHPCDKEMSCRRRFKVHCSEQAWTVTHKLGLYSSLAHSELSSVFYDKVLLLAWGYKNIFVLIIGITVLIFATVGVLLIMETLSAFLHALRLHWIEFQNKFYEGDGYKFCPSFTSLHEEDES 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0962 596 Pfam Domain of unknown function (DUF702) 122 173 - -
Lele02g0962 596 Pfam V-type ATPase 116kDa subunit family 279 441 IPR002490 GO:0033179|GO:0046961|GO:1902600
Lele02g0962 596 Pfam V-type ATPase 116kDa subunit family 509 585 IPR002490 GO:0033179|GO:0046961|GO:1902600
Lele02g0962 596 PANTHER VACUOLAR PROTON ATPASES 279 444 IPR002490 GO:0033179|GO:0046961|GO:1902600
Lele02g0962 596 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 124 172 IPR006511 -
Lele02g0962 596 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0962 Lele-ChrLele02 5846672 5856424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0962 509 595 Primary Pumps ATPases(2) AT4G39080 78.409 4.81e-37 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Lele02g0962 V_ATPase_I 3.7e-34 No_clan