Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0961 ATGGGTCGCCATTCACTATTGGCTCTCCTGCTCTTTTCCCTCCTATCAGCGGCTGTGGCCACGAGGGAGGGAATCGACGATGAAGATGACCTCTTGATCCGGCAAGTGGTGCCGGACAACGACGATCACTTGCTCAACGCCGAACACCATTTCTCCACCTTCAAGAGTAATTTCGGCAAGACCTACGCTACTAGAGAGGAGCACGACCATCGTTTTGGTGTCTTCAAAGCTAACTTGCGCCGGGCTAAGTTACACCAGAAGCTTGATCCCACCGCCGTTCACGGCGTTACTAAATTCTCCGATCTTACTCCCTCGGAATTTCGCCGGCAGTACCTAGGCCTTAGGCCACTTCGTCTTCCCTCCGATGCTCAAAAGGCTCCGATCCTGCCTACGAGCGATCTTCCTACGGACTTCGATTGGCGAGATCATGGAGCAGTCACTGGCGTCAAGGACCAGGGAGCATGTGGATCATGCTGGTCGTTTAGCACCACAGGAGCGTTGGAAGGAGCTCATTTTCTGTCGACTGGCGAGCTCGTGAGCCTTAGCGAGCAACAGCTAGTGGATTGTGACCATGAGTGTGATCCAGAAGAAGCTGGAGCATGTGACGCAGGCTGCAACGGTGGGTTGATGACCTCTGCATTTGAATACACCCTGAAGGCCGGTGGGCTGGAGCGAGAAAAGGACTATCCTTACACTGGAACAGATCGCGGTCCGTGCAAATTTGACAAAAGCAAAATTGCTGCTTCCGTGGCTAATTTCTCTGTGATTTCCATGGACGAAAATCAAATTGCTGCAAATCTGGTTAAGCATGGCCCTCTTGCAGTTGGTATAAATGCAGTTTTTATGCAGACATACGTAGGTGGCGTTTCATGCCCATATATATGCGGGAAGCATTTGGATCACGGGGTTCTTCTGGTGGGCTATGGGTCTGCTGGTTATGCCCCCATCCGCTTCAAGGAAAAGCCCTTCTGGATCATTAAGAATTCATGGGGAGAGAGCTGGGGAAACGATGGATATTACAAGATCTGCAGGGGTCGTAACGTGTGTGGAGTGGATTCCATGGTCTCAGGCGTGGCTGCTTTGAGTACTCCTACACAATCTTAA 1104 0.5145 MGRHSLLALLLFSLLSAAVATREGIDDEDDLLIRQVVPDNDDHLLNAEHHFSTFKSNFGKTYATREEHDHRFGVFKANLRRAKLHQKLDPTAVHGVTKFSDLTPSEFRRQYLGLRPLRLPSDAQKAPILPTSDLPTDFDWRDHGAVTGVKDQGACGSCWSFSTTGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEAGACDAGCNGGLMTSAFEYTLKAGGLEREKDYPYTGTDRGPCKFDKSKIAASVANFSVISMDENQIAANLVKHGPLAVGINAVFMQTYVGGVSCPYICGKHLDHGVLLVGYGSAGYAPIRFKEKPFWIIKNSWGESWGNDGYYKICRGRNVCGVDSMVSGVAALSTPTQS 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0961 367 SMART pept_c1 134 359 IPR000668 GO:0006508|GO:0008234
Lele02g0961 367 FunFam Cysteine protease RD19A 31 359 - -
Lele02g0961 367 SMART Inhibitor_I29_2 51 107 IPR013201 -
Lele02g0961 367 Pfam Papain family cysteine protease 134 356 IPR000668 GO:0006508|GO:0008234
Lele02g0961 367 Pfam Cathepsin propeptide inhibitor domain (I29) 51 107 IPR013201 -
Lele02g0961 367 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 152 163 IPR000169 -
Lele02g0961 367 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 323 342 IPR025661 -
Lele02g0961 367 PRINTS Papain cysteine protease (C1) family signature 152 167 IPR000668 GO:0006508|GO:0008234
Lele02g0961 367 PRINTS Papain cysteine protease (C1) family signature 301 311 IPR000668 GO:0006508|GO:0008234
Lele02g0961 367 PRINTS Papain cysteine protease (C1) family signature 323 329 IPR000668 GO:0006508|GO:0008234
Lele02g0961 367 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 47 352 - -
Lele02g0961 367 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 299 309 IPR025660 -
Lele02g0961 367 CDD Peptidase_C1A 135 356 IPR039417 -
Lele02g0961 367 Gene3D Cysteine proteinases 26 359 - -
Lele02g0961 367 SUPERFAMILY Cysteine proteinases 47 356 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0961 Lele-ChrLele02 5844371 5846292 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele28g0108 28 636758 638107 Lele02g0961 02 5844371 5846292 CCT
Lele02g0961 02 5844371 5846292 Lele02g0961 02 5844371 5846292 ECH