Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0947 ATGTTAAAATCAAAATCTAGAGACCTCCCTGATTGTTTATGTTCTAATCCGCCTATCGTAATCCGCCCCAGTGCTGCCACACCAAATCACTCTCTCTATCTCTCAAACCTCGACGACCAAAAGTTCCTCAGATTCTCCATTAAGTATTGTTATCTGTTCAGCAAATCCGTGAGCTTTGATGCGTTGAAGCTTTCCCTGTCCAGAGTTCTAGTGGATTACTATCCATTAGCTGGGAGACTGAGAGCCAGCGATGAAGACCAAGGAAAGCTCCACGTGGACTGTAACGGAGAAGGAGCTCTTTTCATTGAAGCATTCCTGCCCATCACTGCCGATGAATTACTTGAATCTTCCAACATGCCAAACAAGTCCTGGAAAAAGCTCTTATATAAGGTGGAAACTCAAAGTTTATTGGACGTTCCTCCTCTTATTGTCCAGGTGACGAGTCTCCGATGCGGAGGAATGGTGGTGTGTACCGCCATCAACCACTGTATATGCGATGGCATAGGCACATCGCAGTTTTTAAACGCCTGGGCCCACTTTACTAGGTCGCCAGACTGTGAATTACCGCTTCTGCCCTTTCACTCTCGAAGCCTCCTAAAGCCTCGTAATCCTCCACAGGTGAAGTTTTCACACTCAGGATATGCAACAAAAACAAACTCATCATCCTCTCAGGTGGACCTGGTAAAGCTGTTGCAGTCGCAGCCCCTGGTGGCCACGTGCTTCACTTTCACATCTTCTCATCTTATTCATCTCAAGAAACAGTGCGTTGTAAAGTGCACGACCTTCGAAGCTCTGGCTTCACACACGTGGCGATCCTGGGTTCGATCACTGGACCTATCCACCCCTCTCAAGGTGAAGCTCCTTTTCTCTGTCAACGTTCGCAAAAAGCTGAACCCAGAAATCCCTCAGGGGTATTATGGGAATGGATTCGTGTTAGGTTGCGTTGAGAGCACGGTAGAAGAGTTGCTTGTGGCAGCAGGCCTGAACAATGGCGTGAAACTGGTGCAACAAGGGAAGGCAAGCTTGGACGATGAGCATGTGAGGTCCATGATTGATTTGTTGGAGGACAAAACGGTAAAAACGGACCTATCAGCTAGCTTGGTGATATCACAGTGGGCGAAGCTAGGGTTAGAGGATGTAGACTTTGGAGGAGGGAAGGCACTGCAAATGGGTCCTTTGACCAGTGATATTTACTGTTTGTTTTTACCGGTGGTGGGTGATTCTGATGCAGTAAGAGTGATGGTGTCAGTGCCTGAGGGCGTGGTTGAAAAATTTGAGTTTTACATGAAAGGGTATATTTGTGATAAAGCTGAAAACGGACATGTGGTTCATAAGAATGGCTATCACCCTCAACAAAATGGTTTTATCTGA 1371 0.4675 MLKSKSRDLPDCLCSNPPIVIRPSAATPNHSLYLSNLDDQKFLRFSIKYCYLFSKSVSFDALKLSLSRVLVDYYPLAGRLRASDEDQGKLHVDCNGEGALFIEAFLPITADELLESSNMPNKSWKKLLYKVETQSLLDVPPLIVQVTSLRCGGMVVCTAINHCICDGIGTSQFLNAWAHFTRSPDCELPLLPFHSRSLLKPRNPPQVKFSHSGYATKTNSSSSQVDLVKLLQSQPLVATCFTFTSSHLIHLKKQCVVKCTTFEALASHTWRSWVRSLDLSTPLKVKLLFSVNVRKKLNPEIPQGYYGNGFVLGCVESTVEELLVAAGLNNGVKLVQQGKASLDDEHVRSMIDLLEDKTVKTDLSASLVISQWAKLGLEDVDFGGGKALQMGPLTSDIYCLFLPVVGDSDAVRVMVSVPEGVVEKFEFYMKGYICDKAENGHVVHKNGYHPQQNGFI 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0947 456 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 21 418 - -
Lele02g0947 456 Gene3D - 224 429 IPR023213 -
Lele02g0947 456 Gene3D - 17 216 IPR023213 -
Lele02g0947 456 Pfam Transferase family 20 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0947 Lele-ChrLele02 5740719 5742932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0947 20 429 Monolignol Biosynthesis Gene Families AT5G48930 29.705 5.04e-53 182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0947 02 5740719 5742932 Lele25g0191 25 1136985 1141998 CCT
Lele02g0947 02 5740719 5742932 Lele26g0199 26 1174590 1179257 CCT
Lele02g0947 02 5740719 5742932 Lele27g1892 27 23590018 23594958 CCT
Lele02g0947 02 5740719 5742932 Lele28g0204 28 1195792 1200496 CCT
Lele02g0947 02 5740719 5742932 Lele03g0942 03 5470399 5472958 hybridization
Lele02g0947 02 5740719 5742932 Lele04g0939 04 5783040 5785213 hybridization