LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele02g0884	ATGTTGAGGGATGAAACTGTCGGTTCGAGAAGCGCGAGGCATAGCGCCACCGTCTCTGCGGCATCAAATAAAGTTCTGGTGGCCGTGAAGGTGGAGCGGGTGATCTCCAAGACCGCATTGACATGGGCACTCACTCATGTCGTTCGCTCCAGCGATTGCATCACGCTGCTCGCTGTATACTGTGGCGAGAAAACTGGCAGAAGATTCTGGCATTTTTCGAGACTGGCAGGAGATTGCACGAATGGACGGCCGGAAAAGTTGCCGGAGCGGATTCATGAAATCTCCGAGTCTTGTGCACAGATGGTGCTTCAGTTGCACAATCAGACTGAGGTGAGGGTGAAGATCAAGGTGGTCACCGGAACACCCAGTGGTGCGGTGGCAACTGAAGCAAGATGTAGTGGGTCTAATTGGGTCATACTGGACAAGAAGTTGAAACAAGAGGTGAAGCATTGCATGGATGAACTCCAATGTAGTATCGTGATGATGAATGGTTCACAGCCAAAAGTTTTAAGGCTTAATTTAGGGTCCTATGATGAATTCCAAACCCCTACCTTTTCTACTGCCTCTTCCCCAGGAATTGATATTGGAAGGCTACGAGGTCACCGATTGAAGCCCTCCACCCCAGCCAGCAGCCCTGAAGAAGGAGCTACTTCTAATACAGCATCTACCTTGGTAAATTCAGTGTCATCTTCTGACACTATGCCCTCTTTTTTTCTGGTCTATGAACAAAATCCTCTGTTCGAGGGTCAGGGTCCACAGAGAAGGAAACAGAGACCAATCAATGAACCCAAAAATTTCGACGACCAACCCCCATTAGCCTTTGAATTGGACAGGGAAAGGATTAATCACACTTTGACCAAATCCCCGGTATCATCTGTGGTTAGTGATGAGAAAAGTGCGTTTTGGAGTCCTCAAAATCACCTTGTCGATGAGAAGCCTCAAATAACAGAAAACACTACAATTAGTAGAAGATCTAAATCTCCCACTTCTAAAACTTTACTTGAAAGATTTGAACATTGTGATCAGGAGATGTGGAGTGATGAAGAAGGACATGAGCAAGCTCAAAGTGGAAATTATGTTGTAAAATCATGCATCAAGTATACCATTCCTGCAGTCAGAACTTCCTCAGTACCTCGTCCCCTATGCTCATACTGTCAAAACAAAACACCAGTTTTTGGAAAACCTCCTAGACGCTTCCACTACAAAGAATTAGGGGAAGCTACTGATATGTTTTCAGAGATGAATTTTTTGGCTGAAGGTGGATTTGGGATAGTTCACAAGGGAGTGCTACGAGATGGTCAGGTCGTTGCAGTGAAACAGTTAAAGTTTAGTGGCTCTCATGCAGATCTTGATTTCTGTAGGGAAGTCCGAGTATTGAGCTGCGCACAACACAGAAATGTTGTGCTGTTGATAGGATTCTGCGTGGAAGGCGATTTGAGGATATTAGTCTATGAGTACATATGCAATGGATCCTTAGAGCTCTATCTGCATGGAAAGAACAAAGGAGCCCTAGATTGGAACTCACGCTTGAAGATAGCAATAGGAGCTGCACGAGGACTACGCTACCTTCATGAGGATTGTAGAGTGGGCTGTATAGTGCACAGAGACTTTCGACCCAGGAATATACTCTTAACCCATGATTTTGAACCTGTGATGGCGGATTTTGGCCTTGCAAGGTGGCAGTCAGAATGGAACTTAAATGCTGATGATCGAGTCATTGGAACTTCAGGGTATCTTGCGCCGGAGTATCTTGATGCTGGAAATCTTACATATAAAGTAGATGTGTATGCATTCGGAATTGTCTTGTTAGAGTTAATAACAGGTCGAAGAATTAGTGAGTTGGAACACAACAACGGACCCTCGTTTCTTTCAGAATTCTTTCAACCCCTGCGCATGTTACAATCCAATCATATATTAGAAAACCTCCAAATTCTGAATCCATGCTTGGAGATCGAGGCGTCACGGCAATTGAATCTTAAGTTACAAGCAATGGCCCGAGCTGCTTCCTTGTGTCTACGTCCAGATCCTGATGCCAGACCCCCAATGTCGAAGATCCTCAGAATGCTGGAAGGGGGCGATCCAGTTCGTCCTACGGGTTTAGACCTAAACTCGGTTGGTAACGCAAGTGGCCATTTAAGAGGACTGACGTCCCACGCTCAACCTCAAGGTACAAGAAGCCACTCTCGTAGGCTCTCACATTAA	2202	0.4559	MLRDETVGSRSARHSATVSAASNKVLVAVKVERVISKTALTWALTHVVRSSDCITLLAVYCGEKTGRRFWHFSRLAGDCTNGRPEKLPERIHEISESCAQMVLQLHNQTEVRVKIKVVTGTPSGAVATEARCSGSNWVILDKKLKQEVKHCMDELQCSIVMMNGSQPKVLRLNLGSYDEFQTPTFSTASSPGIDIGRLRGHRLKPSTPASSPEEGATSNTASTLVNSVSSSDTMPSFFLVYEQNPLFEGQGPQRRKQRPINEPKNFDDQPPLAFELDRERINHTLTKSPVSSVVSDEKSAFWSPQNHLVDEKPQITENTTISRRSKSPTSKTLLERFEHCDQEMWSDEEGHEQAQSGNYVVKSCIKYTIPAVRTSSVPRPLCSYCQNKTPVFGKPPRRFHYKELGEATDMFSEMNFLAEGGFGIVHKGVLRDGQVVAVKQLKFSGSHADLDFCREVRVLSCAQHRNVVLLIGFCVEGDLRILVYEYICNGSLELYLHGKNKGALDWNSRLKIAIGAARGLRYLHEDCRVGCIVHRDFRPRNILLTHDFEPVMADFGLARWQSEWNLNADDRVIGTSGYLAPEYLDAGNLTYKVDVYAFGIVLLELITGRRISELEHNNGPSFLSEFFQPLRMLQSNHILENLQILNPCLEIEASRQLNLKLQAMARAASLCLRPDPDARPPMSKILRMLEGGDPVRPTGLDLNSVGNASGHLRGLTSHAQPQGTRSHSRRLSH	733

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele02g0884	733	Pfam	Protein tyrosine and serine/threonine kinase	415	687	IPR001245	GO:0004672\|GO:0006468
	Lele02g0884	733	PANTHER	OS01G0750732 PROTEIN	223	692	-	-
	Lele02g0884	733	MobiDBLite	consensus disorder prediction	697	733	-	-
	Lele02g0884	733	SUPERFAMILY	Protein kinase-like (PK-like)	391	690	IPR011009	-
	Lele02g0884	733	Gene3D	HUPs	9	177	IPR014729	-
	Lele02g0884	733	ProSiteProfiles	Protein kinase domain profile.	411	696	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele02g0884	733	FunFam	Adenine nucleotide alpha hydrolase-like domain kinase	383	486	-	-
	Lele02g0884	733	MobiDBLite	consensus disorder prediction	248	270	-	-
	Lele02g0884	733	FunFam	Os07g0541700 protein	487	575	-	-
	Lele02g0884	733	Gene3D	Phosphorylase Kinase; domain 1	375	486	-	-
	Lele02g0884	733	ProSitePatterns	Tyrosine protein kinases specific active-site signature.	532	544	IPR008266	GO:0004672\|GO:0006468
	Lele02g0884	733	MobiDBLite	consensus disorder prediction	702	733	-	-
	Lele02g0884	733	Gene3D	Transferase(Phosphotransferase) domain 1	487	695	-	-
	Lele02g0884	733	MobiDBLite	consensus disorder prediction	210	228	-	-
	Lele02g0884	733	MobiDBLite	consensus disorder prediction	188	228	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele02g0884	Lele-ChrLele02	5372369	5377447	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele02g0884	399	690	Trihelix Transcription Factor Family	AT5G38560	43.537	7.25e-73	248

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_PERK-2	Lele02g0884		PK_Tyr_Ser-Thr	2.3e-41	CL0016