Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0859 ATGCCATGTCCGTTTGACAGTACTGAGGTTGATATTCCATGTGACAGCAAGAGAAGAATCCGCAGATCAGAGCTGGCTAGGGCTCCTTTTGCTTCGCATTGGCTGAGGCTTGCTAGTACTGATGGTGTTCATGTTCGTGTTTCCTGTTCGATCACTGCACTGAACACTTTTGAAGTTAAAGCGTTGAATGAAAAGGCAGAAATGCAGGGAAGCTTGCGAAAGGGCACTGCTAATAAAGTCGAAGGTGGAAAAGCCTCTGACTCCGAATTTCAGATTCATGAGCTGAAAAAGAAGCTTAGACATGAAGAGAACATCCACAGAGCATTGCAGAGGTCTTTTAACAGACCTTTGGGAGCTCTTCCTCGTCTTCCTCCGTATCTCCCCGCCTGCATACTAGCGCTTCTGGCTGAAGTAGCAGTTCTGGAAGAGGAAATTGTTAGGCTTGAAGAGCAGGTAGTACAATCCAGGCAGGACTTGTACCAGGAAGCTGTCTACTTGTCATCTTCTAAGAGAAGAATGGAGCGTTCAGCTAATGTAAACAATGCTAATTCAGTTGAAAGCCCAAGACAGGTCAAATTGAAGTCTTATTCCCATACAATGAGTGGCCCAGCAACATCTACAGCTAGGCTTACGACAACATTACCAGTAGTTTGTGCAAGAGTGGAATCTTATGGTTTGCGCCTATTGAATATCATGCCAGAAGATCGGCAAGGAAAGGAGAATGAATCCTGCACTAATTCTTTTAAGAGAAGCAAGCATTTTTCATGTAACAACCAAACAACTAAAATTCCAATCAAGAAACTTTCAACTGACAATAAATCAGGGAAGAAGTGTTGGGATCCTCATAAGAGGCAGCAAGAATTAAGGGTGAAAAACAAATCAATTGCAGAAGAAGGGAATCCTAGTCCACATGAAAAGGCAGTGGGAGATGACAGCCCTAATATTATTTCAGAAAATATTTTGAAATGCTTATCAACCATCCTCATGAGAATGAGTTCAGTGAAGAATCCAGGTCCTGCAGGTGACATTGAAGGTTGGGATCCATATGGTACCCGTTTGGGATTTGGGAAGAAGGATATTGGTCCATATAATCAACTATGTGCAATTGAAGCCAGATCTTTCAATCCAAAACGAACCTCAAATTCTTTGATTTTGCTGTGTAGATTAAAAATTCTTTTGAGGAAACTTGCCTCTGTCAAGTTAGAAAACCTCAACCACCAGGAGAAACTTGCATTCTGGATCAACATCTACAACTCCTGCATGATGAACGCTTTCATAGAGGATGGCATTCCTGAGAGTCCTGAAATGGTTGTTTCACTGATGCGGAAGGCAACAATAAATGTGGGTGGACACTTGCTAAGTGCAATCACTATCGAACATTTCATCCTAAGACTTCCTTACCACTGGAAATATACGTTTCTGAAGGGAGCAAAGAATCATGAAATGACAGCAAGAAGCATATTTGGACTGGAATTTTCAGAACCTCTAGTGACATTTGCACTCTCCTGTGGAACTTGGTCCTCTCCTACAGTGAGAATTTATACGGCGTCACAGGTGGAGAACCAGCTGGAAGTTGCCAAAAAGGAGTACTTGCAGGCTGCAATTTGTATTTCAACGACCAAGATTGCTATCCCAAAAATACTTGACTGGTCAACCTCAAGCATTTCAGCAAAACCATGA 1680 0.4232 MPCPFDSTEVDIPCDSKRRIRRSELARAPFASHWLRLASTDGVHVRVSCSITALNTFEVKALNEKAEMQGSLRKGTANKVEGGKASDSEFQIHELKKKLRHEENIHRALQRSFNRPLGALPRLPPYLPACILALLAEVAVLEEEIVRLEEQVVQSRQDLYQEAVYLSSSKRRMERSANVNNANSVESPRQVKLKSYSHTMSGPATSTARLTTTLPVVCARVESYGLRLLNIMPEDRQGKENESCTNSFKRSKHFSCNNQTTKIPIKKLSTDNKSGKKCWDPHKRQQELRVKNKSIAEEGNPSPHEKAVGDDSPNIISENILKCLSTILMRMSSVKNPGPAGDIEGWDPYGTRLGFGKKDIGPYNQLCAIEARSFNPKRTSNSLILLCRLKILLRKLASVKLENLNHQEKLAFWINIYNSCMMNAFIEDGIPESPEMVVSLMRKATINVGGHLLSAITIEHFILRLPYHWKYTFLKGAKNHEMTARSIFGLEFSEPLVTFALSCGTWSSPTVRIYTASQVENQLEVAKKEYLQAAICISTTKIAIPKILDWSTSSISAKP 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0859 559 Coils Coil 131 158 - -
Lele02g0859 559 MobiDBLite consensus disorder prediction 293 312 - -
Lele02g0859 559 PANTHER EXPRESSED PROTEIN 87 553 - -
Lele02g0859 559 Coils Coil 92 112 - -
Lele02g0859 559 Pfam Protein of unknown function, DUF547 402 531 IPR006869 -
Lele02g0859 559 Pfam Leucine-zipper of ternary complex factor MIP1 91 162 IPR025757 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0859 Lele-ChrLele02 5210313 5217114 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0198 25 1160145 1163074 Lele02g0859 02 5210313 5217114 CCT
Lele27g1889 27 23568000 23570932 Lele02g0859 02 5210313 5217114 CCT
Lele02g0859 02 5210313 5217114 Lele02g0859 02 5210313 5217114 ECH
Lele02g0859 02 5210313 5217114 Lele03g0873 03 5081525 5084711 hybridization