Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0847 ATGTCAACCAAGAGTGAACACCATACGGTCCCCCTTTCGGTGCTCCTGAAGCGTGAATCAGCAAGCGAGAAAATTGAAAAACCAGAAATTCAGCATGGTCAAGCAAGCCAGAGCAAAAAGGGAGAGGACTTAACGCTACTAAAAACGGAATGCCAGAGGGTGGTGGGGGACGGGGTTTCGACGTATTCTGTTTTCGCACTATTTGATGGACACAAAGGATCTGCTGCTGCTATTTATGCCAAGGAGAATCTACTAAATAATATTTTAATTGTGATCCCTTCGGATCTTAACAGAGATGAGTGGATAGCAGCTTTGCCTCGGGCCTTAGTTGCAGGCTTTGTGAAAACTGATAAAGATTTTCAAGAGACAGCGCAAACATCAGGAACAACTGTGACCTTTGTGATTATAGAAGGATGGGTTGTCACCGTTGCATCTGTTGGTGATTCCCGATGCATATTTGAACCTTCTGAAGGTGGGCTTTATTACCTATCGGCGGATCACAGACTAGACACCAATGAAGAGGAGGTGACACGTATAACAAGTAGTGGGGGTGAGGTTGGTCGTCTAAATACTGGTGGAGGTGCAGAGATTGGTCCTTTGAGATGTTGGCCTGGTGGCTTGTGTCTTTCAAGATCTATTGGTGATATGGATGTTGGACAATTCATTGTTCCTGTACCTTACGTAAAGCAAGTGAAGCTGTCCACATCTGGAGGCAGACTTATCCTCTGCAGTGATGGTGTTTGGGATGCTCTATCTGCAGAAGCAGCCCTTCATTGTTGTCGTGGGATGTCACCAGAGGTTGCAGCACCGCATATCGTTAAAGAAGCGGTACAAGCAAAGGGACTTAGAGATGATACAACCTGCATTGTTATTGATATTTTGCCCCCCGAGAAACCACCTGCTCCTCCTCCGACACATGCTAAAAGACCAATGAAAGGAATGTTTAGATCCATGTTTCGGAGAAAGTCTGCAGAATCATCTTCTTATAACGAAAAAGATTATATGGAGCCTGATGTGGTAATGGAGCTGTACGAGGAAGGATCTGCTATGCTTTCGGAGAGGTTAGATACAAAATATCCGCTCTGCAACATGTTCAGGTTGTTTACATGTGCAGTCTGTCAAGTTGAGATGAAGCCTGGGGAGGGTATATCAATACACGAAGGGGCGTCCAACCCCGCAAAATTGCGTCCCTGGGAGGGTCCATTCCTTTGCCGAAGTTGCCAAGACAAAAAAGAAGCCATGGAAGGGAAAAGAAAATTAGGTGATTGCTTCAGAGTCAGAAGAGTCTCAATTGCATGTTATTATAAGATTTCTGATTTGGAGGAGTGGAATAGCAACCGCCCAAGTGTTGTGGAAGGCTGTGTTAAGTGCAGTGTAAAATACTACAATAGGATGTTGTAG 1401 0.4497 MSTKSEHHTVPLSVLLKRESASEKIEKPEIQHGQASQSKKGEDLTLLKTECQRVVGDGVSTYSVFALFDGHKGSAAAIYAKENLLNNILIVIPSDLNRDEWIAALPRALVAGFVKTDKDFQETAQTSGTTVTFVIIEGWVVTVASVGDSRCIFEPSEGGLYYLSADHRLDTNEEEVTRITSSGGEVGRLNTGGGAEIGPLRCWPGGLCLSRSIGDMDVGQFIVPVPYVKQVKLSTSGGRLILCSDGVWDALSAEAALHCCRGMSPEVAAPHIVKEAVQAKGLRDDTTCIVIDILPPEKPPAPPPTHAKRPMKGMFRSMFRRKSAESSSYNEKDYMEPDVVMELYEEGSAMLSERLDTKYPLCNMFRLFTCAVCQVEMKPGEGISIHEGASNPAKLRPWEGPFLCRSCQDKKEAMEGKRKLGDCFRVRRVSIACYYKISDLEEWNSNRPSVVEGCVKCSVKYYNRML 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0847 466 CDD PP2Cc 62 293 IPR001932 -
Lele02g0847 466 FunFam probable protein phosphatase 2C 12 32 299 - -
Lele02g0847 466 PANTHER PROTEIN PHOSPHATASE 24 292 - -
Lele02g0847 466 ProSiteProfiles PPM-type phosphatase domain profile. 24 293 IPR001932 -
Lele02g0847 466 SMART PP2C_SIG_2 46 293 IPR001932 -
Lele02g0847 466 SMART PP2C_4 21 291 IPR001932 -
Lele02g0847 466 MobiDBLite consensus disorder prediction 1 38 - -
Lele02g0847 466 Pfam Protein phosphatase 2C 57 277 IPR001932 -
Lele02g0847 466 Gene3D - 31 298 IPR036457 -
Lele02g0847 466 SUPERFAMILY PP2C-like 38 293 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0847 Lele-ChrLele02 5151663 5155391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0847 1 422 PP2C-type Phosphatase Gene Family AT1G47380 79.009 0.0 704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele28g0896 28 5781445 5782497 Lele02g0847 02 5151663 5155391 CCT
Lele25g0905 25 5785238 5789031 Lele02g0847 02 5151663 5155391 CCT
Lele27g1173 27 18894160 18897949 Lele02g0847 02 5151663 5155391 CCT
Lele02g0847 02 5151663 5155391 Lele02g0847 02 5151663 5155391 ECH
Lele02g0847 02 5151663 5155391 Lele03g0860 03 5014298 5020054 hybridization
Lele02g0847 02 5151663 5155391 Lele04g0863 04 5280963 5289136 hybridization