Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0845 ATGTCAAATTGCTCTACTTGCATTGCAGTTGCAGCAACCAGTAATCTGACGGTAGGGCCTTCCGCCAAGCTTTCTCTTAGATGGGACCCAGCTATCCAATCTGGCATCTTGCGACCGGTCCCTGATCTCCTCCATGTCGGTTTCCTTCTTTCAAATCCTCGATTTCGACTCCGTCGCCAAATTAGATTTACGTGTTCGATTACGGAATGGCTTGACCATTTAAATGAATTATTGACTAATTTAATGATGATTGCTGGTTTGATTAGAGTAATTTATAAGAGGATGCAAGCGATGGAGAGGCTAGGCAGCTACATTAGTCGGAGCGTGAACACTGTTTCCGGCCCTTTTCATCCTTTTGGCGGCGCTGTAGATATTGTTGTAGTTGACCAGCGAGATGGGAGCTTCAAGTCATCGCCATGGTACGTTCGATTTGGGAAATTTCAAGGTGTTTTAAAAGCAAAGGAGAGAATGGTCAACATTAGTGTTAATGGAGAGGAAGCTAATTTTCATATGTATTTGGATCATAAAGGAGAAGCATTCTTTATTAGGGAAATGGATGCTGAAGAGGGAGAATCTATATTATATCCATCATCTTCTACCGACGAGACAGATAGCCGCCCTCAGGATAATAAGCACCCTTTGAAGTCCGAAAGTTGTAATTTTGAGACAGCCAAGTCAAATTCAGGTGCTCATGTTGATATAAACAATGGCAAACTATTGGCCCGGACTAATTCTCGCCGATCACGGCTTCTTGGTTTTGTATTTAATCGAAGGTCGATGAAGGGCGATGATGGCATTTGCAGGGAAGTAGAACTAAACAGGGTAGATTCATTGGAGCGTGCCGAGATTGCAGCTAACCTTTTGGAGTTAAAATGGTCTACAAATCTTGCAGGCTCTAAACCAGCTCCTAAAAATAGCATACAAACTCGGCAGAGCTCACCCTTCCACGATAACACTGAGAATGCTTCGGGCCAATGTAAATTAAACAAGGAAGCTTGTTGCTGCTCTAATCAAGAAGGTAACAGTTATTCCAACTCTGAATATGAAGGAACTGGCGAGGAGGAGAGCATAAACCCATCATATTTAACCACCCATGACAAAATGGTTGAAAATTTTGTTGCAGGTGAAAGCTTTACAGAAGGGAAAACAAAGGTGAGAGAGGAAGTATCAACAATAATTGATGTTGATGAGGATGCTGAAGTTAACCCAAATGGGAAGGAAGTTGCATTTGATAGCACTAGTTCTGATTTACAAGTTGCATGTGTAAAGCTCGAAACACAGTTTGAAAAGCATCTGAGTGGAGAGGTTTCTGTAATTCCTGGGAAGGATTTTTCAGTAAATGGAGATGGGTCTTTTGCTTATTGCAAGACATCAGAGAGATCGACGTTGGACACGGATTGTTCCACTAATCAAACTCTCGAGGTGTTTTACCTTTCTAGTAGAGGATGTGAATGTCAACAAGTCCATGTGCAGGCTGAAATCTTACATGCCACAACTGTTCTCCTTCCTGAGGTCACAAAAAGTGAGGAAGACGTTAAAAATGCTGATCTCGGGATGCCAGTGGAAGCTTCTGGTGTTAATAACAATGATATGGCAAATGCTGAAGACCCAACAATGATGCCAAACCCTCAAATTTTCAATTTGGATCCAGAACTTTGTTCACTTGAGGAGGTTCAGTCAAATTGTGTTGCAGCAACTTCCTGTTACAGCTGCCTGGATAACCAAGTATTGGATGAGAATAAAAGGGAAAATGACGATTCAAGCATGTTATCATCTCCCCAGGTTTCCGTAGGAGATTGTGTCCTTAGCAATGCTACAAGTAGACCTCCACCAAAGGAAGAACATACCCACTCCACCGATATGTATAAATGCCAAATTACTGATCAGTGTAATGGGTCAATCTCCCCTGATTTTGTAGATGAAGTTTTTATTTCATATGTGGATAGCATTGAAAAAGTGAACGAGGTAGTTGATACAAATTGTGGTTCACAGTCATCTCGGGAAAGCTCAACCACTGAAAGTCACATAGATGACCTTCAAGAGTTTAGACAAACATGTCCCATAGTTATAACTAGAAATAAGGCTGCTAGGGAAGAAGTTGACATGCTGACAGGATCGTTGCCCAAGATGTCTTCACATAGTGACAATCTTAAAAACCACGGTGTTTCTCATCCTTTAAGTCAATCACTTGACTCAAAGTCCAAATCGTTGAAGTGGACATCTCCCGCCAAGAATTACTTGAAACGTATAAAATCAGACGGAGACAAAGAAAACCAGTTACTGGATGAGGAGTTGGGTGACAAGGAGAACCATAGCTTTATAGACTTCAGGAGTACTGTTCATCCTCCCATTGGAAATCCATCAAGACTCAACCGTTCTCCTGGTGGAAACTGGGGGCTTTGGCCATTCTCCTTCAGGAGATCAAGATCTGGAAGGGCTGAGCAGCCTGCTCCCAGTGATGACAAAAATACTACTTCTGGCAATGCTTCAGAGGGTACAATGGGTACTGATGCAGAAAAAAATAAGCTCAAGCCCAATCCAAGAAGAAAAAAGGTTAGGACAAAGACTCCAACGTCTGAACAGCTGGCATCCTTAAATCTCAAGAAAGGGAGGAATACAATAACCTTCACATTCTCTACTGATATGCTGGGGAAGCAACAGGTTGATGCTCAAATATATTTGTGGAAATGGAACACCCGTATAGTGATCTCAGATGTGGATGGGACAATTACAAGGTCAGATGTTCTAGGACAGTTCATGCCTTTGGTTGGAGTAGATTGGTCACAGACTGGGGTTGCGCATTTATACTCAGCTATCAAGGAAAATGATTACCAATTGCTTTTTCTTAGCGCTCGTGCAATTTCTCAGGCCTATCACACCAGACAATTCCTATTCAACCTTAAGCAGAATGGAAAAGTCTTACCTGATGGTCCTGTTCTTATTTCCCCAGATGGACTTTTTCCCTCACTATATCGAGAAGTATTTGGACTAAGATTTCCTGCTTTTCAATATCCAGTTATCAGAAGGGCTCCGCATGAATTCAAAATTGCATGCTTAGAGGATATCAAGGCACTTTTTCCTTCAGATTGCAATCCATTTTATGCTGGTTTTGGAAATAGGAACACTGATGAAATCAGCTACCTTAAGGGAGAGGTTGCTGTAAACCATCTTCTTGATACAAAATCATATCCTTCTCTTCATGCTCTCGTAAATGGAATGTTCCCCGCTACGAACTCATCTGAGCAGGAGGACTTCAACTCATGGAATTTCTGGAAGCTTCCTCCTGCTGTAGATATATGA 3300 0.4191 MSNCSTCIAVAATSNLTVGPSAKLSLRWDPAIQSGILRPVPDLLHVGFLLSNPRFRLRRQIRFTCSITEWLDHLNELLTNLMMIAGLIRVIYKRMQAMERLGSYISRSVNTVSGPFHPFGGAVDIVVVDQRDGSFKSSPWYVRFGKFQGVLKAKERMVNISVNGEEANFHMYLDHKGEAFFIREMDAEEGESILYPSSSTDETDSRPQDNKHPLKSESCNFETAKSNSGAHVDINNGKLLARTNSRRSRLLGFVFNRRSMKGDDGICREVELNRVDSLERAEIAANLLELKWSTNLAGSKPAPKNSIQTRQSSPFHDNTENASGQCKLNKEACCCSNQEGNSYSNSEYEGTGEEESINPSYLTTHDKMVENFVAGESFTEGKTKVREEVSTIIDVDEDAEVNPNGKEVAFDSTSSDLQVACVKLETQFEKHLSGEVSVIPGKDFSVNGDGSFAYCKTSERSTLDTDCSTNQTLEVFYLSSRGCECQQVHVQAEILHATTVLLPEVTKSEEDVKNADLGMPVEASGVNNNDMANAEDPTMMPNPQIFNLDPELCSLEEVQSNCVAATSCYSCLDNQVLDENKRENDDSSMLSSPQVSVGDCVLSNATSRPPPKEEHTHSTDMYKCQITDQCNGSISPDFVDEVFISYVDSIEKVNEVVDTNCGSQSSRESSTTESHIDDLQEFRQTCPIVITRNKAAREEVDMLTGSLPKMSSHSDNLKNHGVSHPLSQSLDSKSKSLKWTSPAKNYLKRIKSDGDKENQLLDEELGDKENHSFIDFRSTVHPPIGNPSRLNRSPGGNWGLWPFSFRRSRSGRAEQPAPSDDKNTTSGNASEGTMGTDAEKNKLKPNPRRKKVRTKTPTSEQLASLNLKKGRNTITFTFSTDMLGKQQVDAQIYLWKWNTRIVISDVDGTITRSDVLGQFMPLVGVDWSQTGVAHLYSAIKENDYQLLFLSARAISQAYHTRQFLFNLKQNGKVLPDGPVLISPDGLFPSLYREVFGLRFPAFQYPVIRRAPHEFKIACLEDIKALFPSDCNPFYAGFGNRNTDEISYLKGEVAVNHLLDTKSYPSLHALVNGMFPATNSSEQEDFNSWNFWKLPPAVDI 1099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0845 1099 SMART lns2 901 1067 IPR031315 -
Lele02g0845 1099 Pfam LNS2 (Lipin/Ned1/Smp2) 854 1056 IPR013209 -
Lele02g0845 1099 MobiDBLite consensus disorder prediction 707 735 - -
Lele02g0845 1099 MobiDBLite consensus disorder prediction 194 216 - -
Lele02g0845 1099 MobiDBLite consensus disorder prediction 582 620 - -
Lele02g0845 1099 MobiDBLite consensus disorder prediction 298 321 - -
Lele02g0845 1099 MobiDBLite consensus disorder prediction 706 735 - -
Lele02g0845 1099 SUPERFAMILY HAD-like 893 1048 IPR036412 -
Lele02g0845 1099 MobiDBLite consensus disorder prediction 817 835 - -
Lele02g0845 1099 Pfam lipin, N-terminal conserved region 106 190 IPR007651 -
Lele02g0845 1099 PANTHER LIPIN 95 1096 IPR026058 -
Lele02g0845 1099 MobiDBLite consensus disorder prediction 777 797 - -
Lele02g0845 1099 MobiDBLite consensus disorder prediction 809 861 - -
Lele02g0845 1099 MobiDBLite consensus disorder prediction 587 603 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0845 Lele-ChrLele02 5133019 5139505 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0903 25 5771105 5777581 Lele02g0845 02 5133019 5139505 CCT
Lele26g0909 26 5842400 5847919 Lele02g0845 02 5133019 5139505 CCT
Lele27g1175 27 18904952 18911556 Lele02g0845 02 5133019 5139505 CCT
Lele02g0845 02 5133019 5139505 Lele02g0845 02 5133019 5139505 ECH
Lele02g0845 02 5133019 5139505 Lele03g0858 03 5001231 5007770 hybridization
Lele02g0845 02 5133019 5139505 Lele04g0862 04 5271318 5277665 hybridization