Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0841 ATGGAGTGTGTTGAAGTGAAAGCGCCTCTCTCAGAATCATGTTCAAAGTGGTCTGAGGAGAAGCCAGCAATGGCAGAACGCTCTAAAGAGATTTCTTCTGAAGTTCTAAATCCACCAGACAATATCTATTCTTACATCGAAGCTCCAACCAACGATCAACTCAGCAACGGAAAAGTGAAATCCACCACAAATTTGACTGAGACCACTGAATTTACAGCATCACCTTATGCTTTGGATGGTCATATTGCAGGCCAACATGAATTTTCTCCTATAGTTCATTCAACTTCAATCTCAAATACTATGGATGATGTGAGAGAGAGAAGCAATATTCAGGAAATTGTTATTGGACATACTGAACCACAAGTTAAAGACTATAATATCTCGAATAGTATAACTGCCACTTATAGCATTGATGATCATAACCAAATCATATCATCTTCCTATCATGAAACACAAGATTTGCAGAGTGTCCACAATGAACAAGAGAGTTATCCGCTTTTAAAGGTTGCGAGTTATCCGCCTTTAAAGGTTGCGAGTTATCCGCCTTTAAAGGTCGTCGGTGCTGAAGATCATGATGAGCGTATACTTCCAGCTTCCTCTTTTGAGACAAAAGATTTTCAAAATGACCTCAATGAAGTAAAGTTTGATTCTCCTCAAGCACGTGCTAGTGGTTCTGCTTTTGAAGCCTTGGAAATACTTCAGACTGATGATCATAATAATGAGATTGTACAATCATCTTCCACTTCTGAAGCAAATCATTTGCAAAATGACCACATTGAACAAAAGACTGATCCACCTCAAGTAAATGTTGCCAGTGCCACAACTGAAGTCTTGGGAACGATTCACAATGATGATCATGTTGAAAGTATGCCATCAACTTCCTTTTTGGAACTAAAAGATTTGCAGGATGATCACAATGAACTAAAGATCGATTCGCCGGATAAACAAGTTGCCAGTCCTGCCGTTGAAGTCCATGGAATGGTTAACACTAATGATCATGATGAAATTACAGAATCAATTTCCTCTAGTGGAGTAAGAGATTTGCAAGATGATCTCAACGAGCTAAAGATGAATACACCTGAAGTACAGGTTATCAATGCTGCTAATACCGATGTCTTGGGAATGGATGAGACTCCCACACATGCTAAGCAGGTTGGCCATATTGATACAGCAGCTCCAATTGAATCTGTCAAAGCAGCTGTTTCTAAATTTGGAGGAATTGTTGACTGGAAGGCCCATAGAAACCAAACAGTGGAAAGACGCCAACATGTAGAACAAGAACTCCAGAAAGCACAAGAGGAGATTCCGGGGTATAGAAAACAATTTGAGGCTGCTGAACAGGCAAAAATTCGAGTATTAAAGGAGTTGGATAGCACTAAAAGATTAATAGAAGAACTGAAACTGAACTTAGAGAGGGCACAAACAGAAGAGCGCCAAGCAAGACAGGACTCAGAGCTTGCGAAGCTTAGAGTTGAAGAAATGGAACAAGGTATTGCAGATGGGGCCAGTGTCGCAGCCAAGGCACAACTTGAAGTTGCTAAAGCCAGGTTTTCAGCAGCCATTTCTGAACTAATGTTTGTGAGAGAAGAATTGGAAGGATTGCGCAAGGAATATGCTTCCTTAGAGACTGATAAAGACGTAACTGTTAAGAAAGCTGAAGAAGCTGGTCTTGCATCAAAAGAAGTGGAGAAGACAGTAGAAGAATTGACCATTGAATTAATTGCTGCAAAAGAGTCATTTGAATCGACACATTCTGCACATTTGGAAGCTGAGGAGAAAAGAATAGGAACAATCATGGCTAGAGATCAAGATTCTCATAACTGGGAGAAGGAACTTAAACAGATAGAAGAAGAGATCCATAAACTGAGCCAGCATATTTTTTTAACAAAGGATCTCAAGTCTAAACTAGACATAGCCTCAGGCGTGCTGCTTGATCTGAAAGCTGAATTAGCTGCTTATATGGAATCAAAAGTGATGCAAGAACATGATGTTGAAGGAGTTTCAGAAATAGAACCAGAGGAACTAGAGAAGAAAACACGTATTGTTATAGGGGCAATTGTGGCATCAGCAAGAAAGGAGCTTGAGAAAGTGAAGATCAATTTGGAGGAACGAACTAATGAGGTTAATTGCTTGAAGGTGACTGCTACATCATTAAAATCAGAACTTGAACAAGAGAAATCCACTGTTGCCACCATTAGGCAGAGAGAGGGAATGGCATCCATTGCGGTTGCTTCACTTGAAGCAGAACTAGAGAAGACTAAATCTGAAATAGCTGAAATACAAATGAAGGAGAAAGAGGCTAAAGAAAAAATGATTGAGCTACCTAAGAAACTACAAAAAGCAGCTGAAGATGCTGACCAGATCAACTTATTTGCTCAAGTAGCTCGTCAAGAGCTGCTAAAAGTGAAGGATGAGGCAGAACAAGCCAAGGCTGCAGCAACTACAGTGGAAACCAAATTACTTGCAACTCAGAAGGAGATAGAGGCAGCTAGGGCTTCTGAGAAGTTGGCGATAGCAACTATCAAAGCGTTGCAAGAGAGTGAATCGGCTAGAAAAAAACTTGATGCAGACCCTTCAAATGGGGTGACACTTTCTTTAGAGGAATACTATGAGCTCAGCAAACGTGCCCATGAGGCAGAAGAGCAAGCAAATTTGAGGGTTATAGCTGTGAATTCTGATATTGAGATGGCTAGGGAGTCTGAATTGAAAACCTTGGAAAGATTGGAAGAAGTGAATCAAGAGATGTCTGCCATAAGGGAATCTCTGAAGGTGGCAATGGATAAAGCTGAAAAGGCAACAGAAGGAAAATTAGCTGTAGAACAAGAATTAAGAAAGTGGAGGGCTGAACATGAACAGAGAAGAAAGGCTGGTGAGTCTGACCAAGGAGTGGTAAGCCAGACTCAAAGCCCTACGGACAAGGAAGTAACTTTCCAAGAAGAAGCTCCCGAGGAAGGTAGTCCTGTTCATTATTTGTCAAGTTCAAAGTCTGATTTACATGAAAACAACGCTGACAATAGACCAGCCCCAGAGAAAAAGAATAGTAAGAAGAAAAAGAGGTCATTATTTCCACGTGTTTTAATGTTCTTTGCCAGAAGAAAATCAACAAAGTCTTAG 3114 0.4046 MECVEVKAPLSESCSKWSEEKPAMAERSKEISSEVLNPPDNIYSYIEAPTNDQLSNGKVKSTTNLTETTEFTASPYALDGHIAGQHEFSPIVHSTSISNTMDDVRERSNIQEIVIGHTEPQVKDYNISNSITATYSIDDHNQIISSSYHETQDLQSVHNEQESYPLLKVASYPPLKVASYPPLKVVGAEDHDERILPASSFETKDFQNDLNEVKFDSPQARASGSAFEALEILQTDDHNNEIVQSSSTSEANHLQNDHIEQKTDPPQVNVASATTEVLGTIHNDDHVESMPSTSFLELKDLQDDHNELKIDSPDKQVASPAVEVHGMVNTNDHDEITESISSSGVRDLQDDLNELKMNTPEVQVINAANTDVLGMDETPTHAKQVGHIDTAAPIESVKAAVSKFGGIVDWKAHRNQTVERRQHVEQELQKAQEEIPGYRKQFEAAEQAKIRVLKELDSTKRLIEELKLNLERAQTEERQARQDSELAKLRVEEMEQGIADGASVAAKAQLEVAKARFSAAISELMFVREELEGLRKEYASLETDKDVTVKKAEEAGLASKEVEKTVEELTIELIAAKESFESTHSAHLEAEEKRIGTIMARDQDSHNWEKELKQIEEEIHKLSQHIFLTKDLKSKLDIASGVLLDLKAELAAYMESKVMQEHDVEGVSEIEPEELEKKTRIVIGAIVASARKELEKVKINLEERTNEVNCLKVTATSLKSELEQEKSTVATIRQREGMASIAVASLEAELEKTKSEIAEIQMKEKEAKEKMIELPKKLQKAAEDADQINLFAQVARQELLKVKDEAEQAKAAATTVETKLLATQKEIEAARASEKLAIATIKALQESESARKKLDADPSNGVTLSLEEYYELSKRAHEAEEQANLRVIAVNSDIEMARESELKTLERLEEVNQEMSAIRESLKVAMDKAEKATEGKLAVEQELRKWRAEHEQRRKAGESDQGVVSQTQSPTDKEVTFQEEAPEEGSPVHYLSSSKSDLHENNADNRPAPEKKNSKKKKRSLFPRVLMFFARRKSTKS 1037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0841 1037 Coils Coil 524 551 - -
Lele02g0841 1037 Coils Coil 414 492 - -
Lele02g0841 1037 Pfam Weak chloroplast movement under blue light 386 953 IPR008545 -
Lele02g0841 1037 Coils Coil 715 735 - -
Lele02g0841 1037 Coils Coil 905 949 - -
Lele02g0841 1037 Coils Coil 687 707 - -
Lele02g0841 1037 MobiDBLite consensus disorder prediction 243 266 - -
Lele02g0841 1037 MobiDBLite consensus disorder prediction 959 975 - -
Lele02g0841 1037 Coils Coil 559 579 - -
Lele02g0841 1037 Coils Coil 743 770 - -
Lele02g0841 1037 Coils Coil 598 625 - -
Lele02g0841 1037 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 386 1033 - -
Lele02g0841 1037 Coils Coil 792 812 - -
Lele02g0841 1037 MobiDBLite consensus disorder prediction 947 1023 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0841 Lele-ChrLele02 5113822 5117121 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele28g0228 28 1322606 1328160 Lele02g0841 02 5113822 5117121 CCT
Lele25g0898 25 5745443 5748503 Lele02g0841 02 5113822 5117121 CCT
Lele26g0905 26 5806522 5810999 Lele02g0841 02 5113822 5117121 CCT
Lele27g1181 27 18935644 18938710 Lele02g0841 02 5113822 5117121 CCT
Lele02g0841 02 5113822 5117121 Lele25g0873 25 5585800 5590462 CCT
Lele02g0841 02 5113822 5117121 Lele26g0885 26 5664529 5669839 CCT
Lele02g0841 02 5113822 5117121 Lele27g1206 27 19083783 19087627 CCT
Lele02g0841 02 5113822 5117121 Lele28g0866 28 5582052 5586724 CCT
Lele02g0841 02 5113822 5117121 Lele02g0841 02 5113822 5117121 ECH
Lele02g0841 02 5113822 5117121 Lele03g0856 03 4989269 4992533 hybridization
Lele02g0841 02 5113822 5117121 Lele04g0858 04 5247846 5251121 hybridization