Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0830 ATGGACTGTGGCACTAGGGATGGGCCTAAGTGGTCATTCTCATGGGCGTCCCATGATGATATGGATTTCATGACGCCGCCTCCCCAATTCTCAGGAGCTTACACCCACAGTTATGTAGCGACGGCGGGCTTGACTGTGCCACCGCCTGACCTCTTTGGGAAACCTAATTGGTGTTCACTCGCGAGTACAACTACATCAACGTCGTCTCTCGTGGGTAACCCTACGCCACAAGAACAAGAGCAAGCCAGCTCGATGAGGGAGATGATATTTAGCATAGCAGCGATGCAGCCTATACACATAGACCCAGAGTCAGTGAAGCCTCCGAAGAGGAAGAACGTCAAGATATCGAAGGACCCTCAAAGCGTGGCGGCTCGCCACCGCAGAGAAAGAATCAGCGAGAGAATAAGGATATTGCAGAGATTGGTGCCAGGTGGCACTAAAATGGACACAGCTTCCATGTTAGATGAAGCTATTCACTACCTCAAATTCCTGCAGTCCCAGGTTCACTCCCTCCAACTAGCAGCCTCACATAATACCCCAACATCACTCACCAATCTCTTCATCTCCTCTGGCGCCAATAATAATCCGTCCTCTAATTATCTTTCTCTGCAGCCTCCTCCTCATCCACACCATTACTGCTGA 642 0.5047 MDCGTRDGPKWSFSWASHDDMDFMTPPPQFSGAYTHSYVATAGLTVPPPDLFGKPNWCSLASTTTSTSSLVGNPTPQEQEQASSMREMIFSIAAMQPIHIDPESVKPPKRKNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYLKFLQSQVHSLQLAASHNTPTSLTNLFISSGANNNPSSNYLSLQPPPHPHHYC 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0830 213 MobiDBLite consensus disorder prediction 103 127 - -
Lele02g0830 213 Gene3D - 114 182 IPR036638 GO:0046983
Lele02g0830 213 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 119 173 IPR036638 GO:0046983
Lele02g0830 213 SMART finulus 121 170 IPR011598 GO:0046983
Lele02g0830 213 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 115 164 IPR011598 GO:0046983
Lele02g0830 213 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 72 197 IPR045843 GO:0003700|GO:0006355
Lele02g0830 213 MobiDBLite consensus disorder prediction 102 127 - -
Lele02g0830 213 Pfam Helix-loop-helix DNA-binding domain 125 165 IPR011598 GO:0046983
Lele02g0830 213 FunFam BHLH transcription factor 118 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0830 Lele-ChrLele02 5072693 5073334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0830 83 172 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 88.889 4.28e-43 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele02g0830 HLH 1.7e-07 No_clan