Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0828 ATGACTGTTGGCATGTCGCTAGCTGGTCTTCAAGTTTCAAATTTTCTTCATCTGATCTTCATCCAAAAGAGGACTTTTGTTCTCTCGCTTTTTGAGACGGATCACATGCATGCATATGAATACGAGGACACCAATTCCGTCCCTCTCTCTCCTCTCCTCTCCACCATCCACCTTCTCGCTCCTTTAAGTACCCACACGCCTCCCTCTCTCGCTTTCTCTGATATATATCACTTACTCCCACACTCCCTTGCCCGCGAGAGCGTAAGCGACATGGCTCTTCTTCTCGACAATTGCGACGCCATATTACTTTCCCTTGATTCTCACAAGTCGTTGCCGGCTCCATTCCTCACCAAGACCTACCAGCTCGTCGATGATACCGCCACCGATCACATCGTCTCTTGGGGTGAAGACGACACCACTTTCGTCGTCTGGCGTCCCCCTGAGTTCGCACGCGATCTCCTCCCCAACTACTTCAAGCACAACAATTTCTCCAGCTTTGTTCGCCAGCTCAACACCTATGGCTTCAGAAAGATTGTGCCGGACAGATGGGAGTTTGCAAATGAGTTCTTTAAGAAGGGAGAGAAGCACTTGCTGTGCGAGATCCACCGCAGGAAAACGGCTCAGCCTCATCATTATCAGAACCACCACGAAGTCGGCGTCGGAGTCCCTGGTTTCTTTCCCTTTCCCTCCAGGCTCAGCATCTCTCCTCCCAGTGACTCCGACGACCAGCACAATTGGTGTGACTCACCGCCGCTCATCAACGGCGCCAACTACAACTCTTCCTTCACCGCCCTCTCCGAGGACAACGAAAGGCTCAGACGAAGCAACAACATGCTCATGTCCGAGCTCGCACACATGAAGAAGCTTTATAACGACATAATCTACTTCGTTCAGAACCACGTCAAACCGGTCCCTCCCAGCAGTTCCTACCCTTCCTCTTTGCTGTCTCCGCCCATGACCACCACCACCACAAATGGTTCCATGGCGCAAAGGCCCCTGAACCAGCTTTTGGGTTATTATTCCATGAACAACAAGCAAGCTCCGCCTCTTGTGAACTCACCCACCAACACATCGAAGAGCTCCATAACCATAGTTGAAGAGCCCAGCAATAACAGTTGCAAGACCAAGCTCTTTGGTGTGTCGCTCCAATCTAAGAAAAGGGTGCACCCTGAGTACCGTTTTAATCCCACGAATTCATCGGACGCCAGTAAGGCTCGTTTCGCTTTGGAAAAGGATGACTTGGGCTTCAATCTCATGCCTCCTTCGACTTGTTAG 1275 0.5098 MTVGMSLAGLQVSNFLHLIFIQKRTFVLSLFETDHMHAYEYEDTNSVPLSPLLSTIHLLAPLSTHTPPSLAFSDIYHLLPHSLARESVSDMALLLDNCDAILLSLDSHKSLPAPFLTKTYQLVDDTATDHIVSWGEDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANEFFKKGEKHLLCEIHRRKTAQPHHYQNHHEVGVGVPGFFPFPSRLSISPPSDSDDQHNWCDSPPLINGANYNSSFTALSEDNERLRRSNNMLMSELAHMKKLYNDIIYFVQNHVKPVPPSSSYPSSLLSPPMTTTTTNGSMAQRPLNQLLGYYSMNNKQAPPLVNSPTNTSKSSITIVEEPSNNSCKTKLFGVSLQSKKRVHPEYRFNPTNSSDASKARFALEKDDLGFNLMPPSTC 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0828 424 MobiDBLite consensus disorder prediction 308 327 - -
Lele02g0828 424 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 108 348 IPR027725 -
Lele02g0828 424 Pfam HSF-type DNA-binding 115 204 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele02g0828 424 PRINTS Heat shock factor (HSF) domain signature 153 165 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele02g0828 424 PRINTS Heat shock factor (HSF) domain signature 166 178 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele02g0828 424 PRINTS Heat shock factor (HSF) domain signature 115 138 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele02g0828 424 FunFam Heat stress transcription factor B-4 107 205 - -
Lele02g0828 424 SUPERFAMILY "Winged helix" DNA-binding domain 112 204 IPR036390 -
Lele02g0828 424 Gene3D - 107 206 IPR036388 -
Lele02g0828 424 ProSitePatterns HSF-type DNA-binding domain signature. 154 178 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele02g0828 424 SMART hsfneu3 111 204 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0828 Lele-ChrLele02 5061909 5064959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0828 91 423 HSF AT1G46264 55.556 3.18e-114 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Lele02g0828 HSF_DNA-bind 8.7e-32 CL0123