LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele02g0825	ATGACAAACTATGCGTTTCTGAACGATCGGCTTTCGACGCACACTTCAATTTTTGGGTTACGACTGTGGGTTGTGCTGGGCATATGCGTAGGAGCAGCCATAGTTATTGTTCTGTTTCTCATATCTCTCTGGTTCACCAAGCGCAACACCAATTCTTCCAACCACAACTCTTCACACAGTCTCACCATTCCGAATGTCTCCAAGGAGATCCAGGATATCAGGATTGCCCCTTCGCGCGACCCAACCCGTGGAAGATCCCACTCGTATCCGGAAGCAGAGACTGAGGTGGATAGGGCCCTCGTTCAGCAGCAGGGGGATGATAGCCAGAGAATTCACATAGAGATTGGTAAAGATCACCGGATTTCTTATCCTGATAAGGCTGGTGGTTTATCGCCTGGAAGTGATGAGCAGGGTTCTATTTCTGTGCCTGAGGTTTCGCATTTGGGGTGGGGCCATTGGTACACTCTGAAAGAGATTGAGGTCTCTACAAACGGGTTTGCGGACGAGAACGTCATAGGTGAAGGTGTCTACGGAATTGTTTATCGCGGGGTTTTGCAAGATGATACCAAAGTTGCGATTAAAAATTTGCTGAATAACAGGGGACAAGCTGAGAAGGAATTTAAGGTAGAAGTTGAAGCAATTGGGCGTGTTCGTCACAAGAATTTGGTGAGTTTACTTGGATATTGTGTCGAAGGAGCTCATCGGATGTTTGTGTACGACTATGTTAACAATGGAAACCTAGAACAGTGGCTTCACGGAGATGTTGGGCCTTCTAGCCCTCTGACATGGGAGATTCGCATGAATATAATACTTGGAACAGCAAAAGGGTATGTATCTCCAGAATATGCAAGTACTGGCATGATAAACGAAAAAAGTGATGTGTACAGCTTTGGTGTTCTTATCACGGAGATAATCTCTGTAAGAAACCCAGTAGATTACAGCCGGCCTTCAGCAGAGGTGAACCTGGTTGAGTGGCTGAAGTCCATGGATGCTAACCGGAATGCAGAGGCGGTGCTCGATCCTAGTCTACCTGAGAAGCCCTCTTCAAGGGCACTGAAGCGTGCCTTATTAATAGCTTTGAGATGTGTGGATCCAAATGCCCAGAAAAGGCCAAAGATGGGGCAAATTATACATATGCTTGAAGCTGATGAGTTCCCTTTACGAGATGACCGCAGAACTGGAAGGGAAAATGGACGTTCCCAGCGGATGATCCCAAGAGATGAGTTGAAGGATAAGCGAGTATGTGAACCAGATGACAGTAGTGGATATGAAAGTAGTGTCCAAACTAGCAAGTCCATGGGCAGAAACCAAGAAACCGAAGGCCAATAG	1329	0.4665	MTNYAFLNDRLSTHTSIFGLRLWVVLGICVGAAIVIVLFLISLWFTKRNTNSSNHNSSHSLTIPNVSKEIQDIRIAPSRDPTRGRSHSYPEAETEVDRALVQQQGDDSQRIHIEIGKDHRISYPDKAGGLSPGSDEQGSISVPEVSHLGWGHWYTLKEIEVSTNGFADENVIGEGVYGIVYRGVLQDDTKVAIKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVSLLGYCVEGAHRMFVYDYVNNGNLEQWLHGDVGPSSPLTWEIRMNIILGTAKGYVSPEYASTGMINEKSDVYSFGVLITEIISVRNPVDYSRPSAEVNLVEWLKSMDANRNAEAVLDPSLPEKPSSRALKRALLIALRCVDPNAQKRPKMGQIIHMLEADEFPLRDDRRTGRENGRSQRMIPRDELKDKRVCEPDDSSGYESSVQTSKSMGRNQETEGQ	442

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele02g0825	442	ProSiteProfiles	Protein kinase domain profile.	166	442	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele02g0825	442	FunFam	Putative receptor-like serine/threonine-protein kinase	275	395	-	-
	Lele02g0825	442	SUPERFAMILY	Protein kinase-like (PK-like)	150	381	IPR011009	-
	Lele02g0825	442	MobiDBLite	consensus disorder prediction	421	442	-	-
	Lele02g0825	442	ProSitePatterns	Protein kinases ATP-binding region signature.	172	194	IPR017441	GO:0005524
	Lele02g0825	442	Gene3D	Transferase(Phosphotransferase) domain 1	275	393	-	-
	Lele02g0825	442	MobiDBLite	consensus disorder prediction	72	96	-	-
	Lele02g0825	442	MobiDBLite	consensus disorder prediction	73	94	-	-
	Lele02g0825	442	MobiDBLite	consensus disorder prediction	388	442	-	-
	Lele02g0825	442	Pfam	Protein tyrosine and serine/threonine kinase	170	276	IPR001245	GO:0004672\|GO:0006468
	Lele02g0825	442	Pfam	Protein tyrosine and serine/threonine kinase	277	380	IPR001245	GO:0004672\|GO:0006468
	Lele02g0825	442	MobiDBLite	consensus disorder prediction	388	419	-	-
	Lele02g0825	442	Gene3D	Phosphorylase Kinase; domain 1	142	241	-	-
	Lele02g0825	442	PANTHER	OS01G0323000 PROTEIN	3	276	-	-
	Lele02g0825	442	FunFam	Probable serine/threonine-protein kinase At1g01540	146	241	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele02g0825	Lele-ChrLele02	5024915	5027212	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele02g0825	24	416	Trihelix Transcription Factor Family	AT5G38560	29.501	1.48e-50	180

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-V	Lele02g0825		PK_Tyr_Ser-Thr	3.5e-08	CL0016