Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0820 ATGTGGGAGCACGAACCCCTCCTCACTCTTGGCTTCAAACGCTTACGCCCTCTCGCCCCCAGGCTCCACAACACTCACTCTCACTCTCTTTCCTCTTTCGATCTCAACACCTTCATCAGACCAGACAGTGGCCCCAGAAAGCTCCCTTCCCCTCACCATCACCTTCACCTTCACAAAGAGGAATCTCAGCCAGGAGGAACCAGGTGGAATCCCACTCAGGAGCAGATCGGCGTATTGGAGATGCTCTACAGAAGTGGAATGCGAACTCCAAACGCTGACCAGATAGAACAGATCACTGTTCAGCTTGCCAAGTACGGCAAGATCGAAGGCAAGAATGTCTTCTACTGGTTCCAAAACCACAAAGCCCGCGAAAGACAAAAGCAGAAACGCAACCCTAATACTACTACCACCGCTTCTTCTACTCCTTTAACTTTAGAGACACGGGACCAAGTAGGAGAAGGAGAGGAAGATAGCCCGTTGAGGAAGAGGTGTAGGAGCTTGGCGTTTGAGTGTTTTCAATTAGGAGAAAGCAGGTTGTTACGTAGAGATCATGGGGAATATAAAACTCTGGAGCTTTTCCCTTTGCACCCGGAAGGCAGATGA 603 0.5008 MWEHEPLLTLGFKRLRPLAPRLHNTHSHSLSSFDLNTFIRPDSGPRKLPSPHHHLHLHKEESQPGGTRWNPTQEQIGVLEMLYRSGMRTPNADQIEQITVQLAKYGKIEGKNVFYWFQNHKARERQKQKRNPNTTTTASSTPLTLETRDQVGEGEEDSPLRKRCRSLAFECFQLGESRLLRRDHGEYKTLELFPLHPEGR 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0820 200 SMART HOX_1 64 131 IPR001356 GO:0003677
Lele02g0820 200 Pfam Homeodomain 67 126 IPR001356 GO:0003677
Lele02g0820 200 FunFam WUSCHEL-related homeobox 4 66 133 - -
Lele02g0820 200 PANTHER WUSCHEL-RELATED HOMEOBOX 4 2 200 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Lele02g0820 200 MobiDBLite consensus disorder prediction 123 159 - -
Lele02g0820 200 Gene3D - 66 131 - -
Lele02g0820 200 MobiDBLite consensus disorder prediction 42 70 - -
Lele02g0820 200 MobiDBLite consensus disorder prediction 131 147 - -
Lele02g0820 200 CDD homeodomain 67 128 IPR001356 GO:0003677
Lele02g0820 200 MobiDBLite consensus disorder prediction 46 63 - -
Lele02g0820 200 ProSiteProfiles 'Homeobox' domain profile. 62 127 IPR001356 GO:0003677
Lele02g0820 200 SUPERFAMILY Homeodomain-like 64 131 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0820 Lele-ChrLele02 5004467 5005173 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0820 8 148 Wox Gene Family AT1G46480 57.862 5.50e-53 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lele02g0820 Homeodomain 1.4e-18 CL0123