Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0819 ATGCTACGTGGAGTGTGCAACAGAGAGAAAGAGATGGCTCTGATGGTCCGTGTCGGCCATCTTTGTCATTTTAAAACAACACTCCTTGTGGCCCCCTTTCGTCTCGACACGATAGCAGCCAAGTCAGAAATTCATCCCCTCTCTCTCCCCTCTTCTTATGATCTTCATAATTATCCCTTCTTTCCTGCTTTCATATTCAACCGCGGAGGAGAGAGAGAGAGTATTGCAGCAGGAAGACGATCGATGATGAGAAGCAAGGCAGAGAAGCGAAAGCAAGATGAATCGAGACAGAAACCATACAGAGGTATTCGGATGAGGAAGTGGGGCAAGTGGGTGGCGGAGATTAGAGAACCCAACAAGAGGTCGAGGTTATGGTTGGGCTCCTACACCACTCCGGTGGCCGCCGCTCGCGCTTACGACACCGCCGTTTTCTACCTCAGAGGCCCTTCTGCTCACCTCAACTTCCCCGAATTGTTATTCCAAGACGACAACGATGACCACCGCCTCGTCGTGCAGGGCCACATGTCCCCGGATTCCATTCGCAAAAGGGCCACCGAAGTCGGCGCAAGAGTTGACGCTCTCCAAGCCTCTCTTCATCATACCAATTCACATATTCAAACCCCCTCCGACAAGCCCGACTTGAATGAGTTCCCCAGACCCGAAGATCTTGTGGAGGATTACAATTAG 687 0.5153 MLRGVCNREKEMALMVRVGHLCHFKTTLLVAPFRLDTIAAKSEIHPLSLPSSYDLHNYPFFPAFIFNRGGERESIAAGRRSMMRSKAEKRKQDESRQKPYRGIRMRKWGKWVAEIREPNKRSRLWLGSYTTPVAAARAYDTAVFYLRGPSAHLNFPELLFQDDNDDHRLVVQGHMSPDSIRKRATEVGARVDALQASLHHTNSHIQTPSDKPDLNEFPRPEDLVEDYN 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0819 228 ProSiteProfiles AP2/ERF domain profile. 99 156 IPR001471 GO:0003700|GO:0006355
Lele02g0819 228 MobiDBLite consensus disorder prediction 78 98 - -
Lele02g0819 228 CDD AP2 100 158 IPR001471 GO:0003700|GO:0006355
Lele02g0819 228 FunFam Ethylene-responsive transcription factor 2 98 157 - -
Lele02g0819 228 PRINTS Ethylene responsive element binding protein signature 138 158 IPR001471 GO:0003700|GO:0006355
Lele02g0819 228 PRINTS Ethylene responsive element binding protein signature 100 111 IPR001471 GO:0003700|GO:0006355
Lele02g0819 228 Pfam AP2 domain 100 148 IPR001471 GO:0003700|GO:0006355
Lele02g0819 228 SMART rav1_2 99 162 IPR001471 GO:0003700|GO:0006355
Lele02g0819 228 Gene3D AP2/ERF domain 98 157 IPR036955 GO:0003700|GO:0006355
Lele02g0819 228 SUPERFAMILY DNA-binding domain 99 157 IPR016177 GO:0003677
Lele02g0819 228 MobiDBLite consensus disorder prediction 201 228 - -
Lele02g0819 228 MobiDBLite consensus disorder prediction 214 228 - -
Lele02g0819 228 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 79 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0819 Lele-ChrLele02 4996486 4997389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0819 96 226 AP2-EREBP Transcription Factor Family AT3G50260 58.865 1.88e-50 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele02g0819 AP2 8.9e-11 CL0081