Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0817 ATGAATACTCTTTCACTCTGTTACGCAACGGATCCTTCCCCTTCACTTTTCCTTCGCAGTCTCAGCTCACTTAGCAACCTCCATTTGTGCCGGTCTCCTTCCTTCAATTTCAGAAATGCAGTGTTACTTGCATTCTCACCAAAATCCCCACTTCAAAGTTTGCCTTCAAGCCGATGGCTTACCAGAGCCTGCTCCGCCGCAACTTCCGAAATCGATATGGTTAAGAATAAGGAAGGTATTTATGCCCCCAAACAGAAAAAAGTCGTAGTCTTGTGGGACCTTGATAACAAACCCCCTCGCGGACCGCCGTATCAGGCTGCCATGGCACTCAAGCAGGTGGCACAGCGCTTCGGTGACGTTGTCGACATGTCTGCCTACGCCAATCGCCACGCATTTATCCACTTACCCCAATGGGTTCTCCACGAACGCCGTGAACGGAAGGAAATAGACATTATGGAGCGTAAAGGAGTGATCACGCCTTCTGAGCTGTACGTTTGTGGGGTTTGCGGCCGCAAGTGCAAAACTAATGTCGACCTCAAGAAGCATTTCAAGCAGCTCCATGAGCGAGAGCGTCAGAAAAAGCTTAATCGGATGAGGTCACTTAAGGGGAAAAAGCGCCAGCGTTATAAAGAGAGGTTCATATCTGGGAATCACAAGTACAATGAGGCGGCAAGGTCTTTGATTACCCCTAAGGTGGGATACGGGCTCGCTGCCGAGCTAAGGCGTGCCGGAGTATTTGTGAAGACGGTAGAAGATAAACCGCAAGCCGCTGATTGGGCACTGAAGAGGCAGATGCAACACTCAATGAGCCGAGGGATAGATTGGTTGTTTTTGGTGTCCGACGATTCAGATTTTTCGGATATGTTGAGGAGGGCGAGAGAGGCAAATTTGGGAACGGTAGTTGTGGGTGACTGGGACAGGGCATTAGGGCGGCACGCCGACTTATGGGTTCCTTGGATTGGAGTTGAGAATGGAGAGCTTGCAGAGACAGATTTAGTACCCAAGAACAGAAGAAGAGAGTCTTTTGCTGAAGATGATGGTTTCTTTTCGATATCGCATCATGATGGAGATACTGTTGTTACGAGCGATTTGGATGGAATAGTAGATGAGCTTGTTGCAATGAGAACCGAGTTTAATGATCTGAGAAATGCAACATTTTCGGATGAGGATGAGGAACAAGGGTGGGTTTCGGAAGAACTGGATGATAATTATATGTTAGTAATTGATGACGATGAGGAAACAGATGATGGGTTTTATTGA 1260 0.477 MNTLSLCYATDPSPSLFLRSLSSLSNLHLCRSPSFNFRNAVLLAFSPKSPLQSLPSSRWLTRACSAATSEIDMVKNKEGIYAPKQKKVVVLWDLDNKPPRGPPYQAAMALKQVAQRFGDVVDMSAYANRHAFIHLPQWVLHERRERKEIDIMERKGVITPSELYVCGVCGRKCKTNVDLKKHFKQLHERERQKKLNRMRSLKGKKRQRYKERFISGNHKYNEAARSLITPKVGYGLAAELRRAGVFVKTVEDKPQAADWALKRQMQHSMSRGIDWLFLVSDDSDFSDMLRRAREANLGTVVVGDWDRALGRHADLWVPWIGVENGELAETDLVPKNRRRESFAEDDGFFSISHHDGDTVVTSDLDGIVDELVAMRTEFNDLRNATFSDEDEEQGWVSEELDDNYMLVIDDDEETDDGFY 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0817 419 Coils Coil 184 204 - -
Lele02g0817 419 ProSitePatterns Zinc finger C2H2 type domain signature. 166 187 IPR013087 -
Lele02g0817 419 ProSiteProfiles Zinc finger C2H2 type domain profile. 164 192 IPR013087 -
Lele02g0817 419 PANTHER C2H2-TYPE DOMAIN-CONTAINING PROTEIN 46 362 - -
Lele02g0817 419 CDD PIN_LabA-like 174 304 - -
Lele02g0817 419 Gene3D - 81 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0817 Lele-ChrLele02 4989752 4991011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0817 15 401 C2H2 Transcription Factor Family AT5G52010 63.317 2.66e-172 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele02g0817 None None None