Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0800 ATGCTCGTGGAAGCGGGAACAAAAATCCCTGCAAAACTTTCAAAAGCCAGACGGTCTCACTTAGAATTGCGGGAGGGCCCCTCGAGCAGCCAAGAAGAGGGCCGCGCCGCCATTGCTGAACTGCATGTTTCCACCAAGAAGCGCGTGGTATTGAGAGAGCTCACCAACTTGTCAAATGCTGCCGTACCAGAGAAACCATGCCCTGGGGAAGAGATTCAGAGGGAGAAAAGTAGCAGAGTCAAGAGAAAACTGAGAAAAGTGCTACCCACAACCGCGACGCCGCCGTCCAATCTCAATGGTGCTGATGACCCTCAATTGGCTGTGCCTTATGTTTCTGATATTTTCGATTATCTCCGAAAGTTGGAGGCGAATCCCAGAAGAAGACCGTTACCTGATTACATAAAAAAAGTTCAGAGGGATATTAATCCTAATATGAGAGGCATTCTGGTAGATTGGTTGGTGGAAGTTGTAGAGGAATACAAGCTTGTTTCAGACACTCTTTATCTCACCGTTTCCTATATTGACAAATATCTATCTTCAAACGCTCTCAGTAGGGACAAGCTGCAGTTGCTGGGTGTTTCTTCGATGCTAATTGCCTCAAGATTCAGTAGAGTTGCTCTGGAGAATTATGAGGCTTCTGAACTCCAGTTTGAATTCCTTACTTACTATCTCGCGGAGCTCAGTTTGTTGGATTATAGTTGTCTAAAGTTCTTGCCCTCTTTGGTGGCCGCATCTGTTGTATTTCTTGCTAGATTCATGTTAAGCCCAAACACTCATCCTTGGAATTCCACGCTTCATCAACACTCAGGGTATAAATCATCTGACTTGAAGGACTGTGTATTGGTCATTCATGACTTGTATCTCAGTCGGCGAGGTGGGTCTTTGCTAGCTGTAAGAGCTAAATATAAACAGCATAAGTTCAAATGTGTTGCAACAACGCCTTCTCCTCCAGAGATACCTCTTTCTTATTTTGAAGTTACAGAGACAGATCATTAG 996 0.4468 MLVEAGTKIPAKLSKARRSHLELREGPSSSQEEGRAAIAELHVSTKKRVVLRELTNLSNAAVPEKPCPGEEIQREKSSRVKRKLRKVLPTTATPPSNLNGADDPQLAVPYVSDIFDYLRKLEANPRRRPLPDYIKKVQRDINPNMRGILVDWLVEVVEEYKLVSDTLYLTVSYIDKYLSSNALSRDKLQLLGVSSMLIASRFSRVALENYEASELQFEFLTYYLAELSLLDYSCLKFLPSLVAASVVFLARFMLSPNTHPWNSTLHQHSGYKSSDLKDCVLVIHDLYLSRRGGSLLAVRAKYKQHKFKCVATTPSPPEIPLSYFEVTETDH 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0800 331 SMART Cyclin_C_2 193 316 IPR004367 -
Lele02g0800 331 MobiDBLite consensus disorder prediction 1 35 - -
Lele02g0800 331 Gene3D - 136 202 - -
Lele02g0800 331 Pfam Cyclin, C-terminal domain 202 315 IPR004367 -
Lele02g0800 331 SUPERFAMILY Cyclin-like 204 318 IPR036915 -
Lele02g0800 331 PANTHER CYCLINS 216 309 IPR039361 -
Lele02g0800 331 CDD CYCLIN 218 284 IPR013763 -
Lele02g0800 331 SUPERFAMILY Cyclin-like 102 205 IPR036915 -
Lele02g0800 331 Gene3D - 211 312 - -
Lele02g0800 331 CDD CYCLIN 145 202 IPR013763 -
Lele02g0800 331 FunFam Cyclin A1 174 312 - -
Lele02g0800 331 SMART cyclin_7 151 211 IPR013763 -
Lele02g0800 331 SMART cyclin_7 212 285 IPR013763 -
Lele02g0800 331 ProSitePatterns Cyclins signature. 146 177 IPR006671 -
Lele02g0800 331 MobiDBLite consensus disorder prediction 15 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0800 Lele-ChrLele02 4881591 4883984 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0800 45 325 Core Cell Cycle Gene Families AT1G47230 48.810 2.64e-106 313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0800 02 4881591 4883984 Lele03g0815 03 4782131 4784396 hybridization
Lele02g0800 02 4881591 4883984 Lele04g0819 04 5020972 5023218 hybridization