LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele02g0799	ATGGAGACTCGTGCCGCAAAGAGAAGAGCAGTGGCCGCCACCTTAGCCCAGAACCGAACACCCAAAAGGAAGCGTGTGGTCTTGGGGGAACTTCCCAATTTATCCAACCTTATTGATCCTGTGACTTCGAATCCGGAGCTGGAGCCACAGAAACCAAAATGTCGAAGGAATACGAGGGCCAAGAAAGCCGCGACGACCAAGAGTAGCTTCTCTTCGGGGGATCCCAAGTCGGATGACGCGAAGGCAGTTCGTACTGATGCAAAATCAGACACCGATGCGAATTTGGATGATTTGGAAAATAGCGAGGCTTATGTTTCGGACATTTACAAGTATCTTCGCAAGATGGAGGTGGATCCAAAGAGAAGACCAATGCCTGATTACCTGGAGAAGGTTCAGAAAGATGTTACCGCCAACATGAGGGGAATACTGGTTGATTGGTTAGTAGAAGTTGCAGAAGAGTACAAGCTTCTCTCTGAGACTCTTTATCTCTCTGTTTCGTACATTGATCGCTTCCTCTCTAACAACCTAGTCACAAGGCAGAAGCTTCAGTTGCTGGGTGTTTCATCTATGCTCATCGCATCGAAGTATGAGGAAATTAGCCCTCCCCACGTGGAAGAGTTTTGCTACATCACGGATAATACATACAGGAAGGCTGAGGTTGTAGAAATGGAGGCTGCTATACTCAAATCTCTAAATTTCGAAATGGGTAGCCCCACGAGCCCAAATCTGCAGTTTGAGTTCCTTTGCTGCTATCTTGCCGAGTTAAGTTTGTTGGATTACAATTGTATCAAATTTTTAGCTTCTCTGGTGGCTGCGTCAGTCATGTTTCTGGCCAACTTTACCATCCGGCCTAAGGTGCATCCCTGGAATTCAATCCTGCAAGATTGCACGGGATATAAACCAGATGAGTTGAAGGATTGTGTGCTTATCTTACACGACTTGTGCTTGGCAAGAAGGGGAGGATCTTTGCAAGCTGTGCGGGAGAAATACAAACAGCACAAGTTGGGAGTTGTCTAA	1017	0.4661	METRAAKRRAVAATLAQNRTPKRKRVVLGELPNLSNLIDPVTSNPELEPQKPKCRRNTRAKKAATTKSSFSSGDPKSDDAKAVRTDAKSDTDANLDDLENSEAYVSDIYKYLRKMEVDPKRRPMPDYLEKVQKDVTANMRGILVDWLVEVAEEYKLLSETLYLSVSYIDRFLSNNLVTRQKLQLLGVSSMLIASKYEEISPPHVEEFCYITDNTYRKAEVVEMEAAILKSLNFEMGSPTSPNLQFEFLCCYLAELSLLDYNCIKFLASLVAASVMFLANFTIRPKVHPWNSILQDCTGYKPDELKDCVLILHDLCLARRGGSLQAVREKYKQHKLGVV	338

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele02g0799	338	CDD	CYCLIN	246	312	IPR013763	-
	Lele02g0799	338	MobiDBLite	consensus disorder prediction	77	94	-	-
	Lele02g0799	338	Gene3D	-	107	336	-	-
	Lele02g0799	338	PIRSF	Cyclin_A_B_D_E	1	338	IPR039361	-
	Lele02g0799	338	CDD	CYCLIN	139	228	IPR013763	-
	Lele02g0799	338	FunFam	Mitotic cyclin 6	123	218	-	-
	Lele02g0799	338	Pfam	Cyclin, N-terminal domain	107	235	IPR006671	-
	Lele02g0799	338	ProSitePatterns	Cyclins signature.	140	171	IPR006671	-
	Lele02g0799	338	PANTHER	CYCLINS	79	332	IPR039361	-
	Lele02g0799	338	SUPERFAMILY	Cyclin-like	241	336	IPR036915	-
	Lele02g0799	338	SMART	cyclin_7	145	229	IPR013763	-
	Lele02g0799	338	SMART	cyclin_7	233	313	IPR013763	-
	Lele02g0799	338	MobiDBLite	consensus disorder prediction	24	94	-	-
	Lele02g0799	338	SUPERFAMILY	Cyclin-like	100	235	IPR036915	-
	Lele02g0799	338	FunFam	Cyclin A1	219	338	-	-
	Lele02g0799	338	SMART	Cyclin_C_2	162	338	IPR004367	-
	Lele02g0799	338	Pfam	Cyclin, C-terminal domain	240	336	IPR004367	-
	Lele02g0799	338	Gene3D	-	123	236	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele02g0799	Lele-ChrLele02	4875098	4877186	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele02g0799	5	338	Core Cell Cycle Gene Families	AT1G47210	56.125	2.03e-129	373

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lele02g0799	02	4875098	4877186	Lele02g0799	02	4875098	4877186	ECH
	Lele02g0799	02	4875098	4877186	Lele03g0814	03	4777159	4779105	hybridization
	Lele02g0799	02	4875098	4877186	Lele04g0818	04	5012795	5015022	hybridization