Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0713 ATGGATGACGATGCAGTAGCAGCCTTGATGGCCGACATTGGTCCATTATTAGATCATCCTATGATGTTTTCCGTTGGATCATCGTCAGACAACAACGTTGAAGCGGGCTCTTCTGAATTCCACCACCACCAGGAAAATATTTCAGTCCCTCATCAGAATCTGAGTGCTGCAGCATTGTGGCCAGATTTTTCCGATAAAAGCATAAAGCATATCAAGACTTTCCTAGTCCGACACTGCTGGAACCAAAATTCAATGGGCTACTTCATGATGCAAGATCCACTCTCTCCGTATTACGAAGCCCTCTGCTCTGGATTGGATTGGGCTGAAGACTCCAATGATTACTTCAGTGACCATAAATCTGACATTTCAGGAGCAAAATCTGGTATGGAACAAGAAGTGGATGCGGGGGATAACGTGGAAAGGACTTCAAACACTTGCCCTGCGGAAAAGGGGAATGAAATGCAGAGGGAGGGGATCGAGAAGATGAAATTGAGTGATATGAGAGACTTATTTAGTCTACCAATTCAAAAAGCAGCCAAGAAGTTGAAGTTATGTCCCACAGAAATGAAGAAAATATGTCGTAAACAAGGATTACAACGATGGCCTCACAGAAAGGTGAAAAGCATAATGAGGCAAATATCGATATTGAGAATGGCTTTAGAATCAGAAGAAGGTGCATCAACAAGGTCACAGACTGAAGCAGAAATTGAGAGACTAGAACAGGAAATGATTCGGCACTGTGGTGGATTCCCCCCAACTTCATTCAATTTCGAATGA 777 0.4311 MDDDAVAALMADIGPLLDHPMMFSVGSSSDNNVEAGSSEFHHHQENISVPHQNLSAAALWPDFSDKSIKHIKTFLVRHCWNQNSMGYFMMQDPLSPYYEALCSGLDWAEDSNDYFSDHKSDISGAKSGMEQEVDAGDNVERTSNTCPAEKGNEMQREGIEKMKLSDMRDLFSLPIQKAAKKLKLCPTEMKKICRKQGLQRWPHRKVKSIMRQISILRMALESEEGASTRSQTEAEIERLEQEMIRHCGGFPPTSFNFE 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0713 258 Pfam RWP-RK domain 162 209 IPR003035 -
Lele02g0713 258 ProSiteProfiles RWP-RK domain profile. 149 229 IPR003035 -
Lele02g0713 258 MobiDBLite consensus disorder prediction 130 154 - -
Lele02g0713 258 PANTHER PROTEIN RKD4 60 243 IPR044607 GO:0003700
Lele02g0713 258 Coils Coil 222 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0713 Lele-ChrLele02 4315579 4316913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0713 133 226 NLP Transcription Factor Family AT2G17150 34.343 2.05e-13 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Lele02g0713 RWP-RK 5.5e-20 No_clan