Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0711 ATGGATGGCGTTAATAGGAATCAAGTTCCAAAACCAGGCGAAGCAAGCATGACGGGGAAGAAAACGGCTAATGCAGGCGAAGTGTTGGTGGCAATCTCTGTTCAAGACTCCAAAGTGGCTGAATGCCATGACCTCAATACTGGGTATGCTGCATCGAAGTCTCCACGTTTAAACGGTGCTTCCCCTGAAATACGGTTCAGTCCCAGCCCAAAGAAGCCTCCCAAGCATCCTCTTGGCAACGAACACCCTGTTCTAAGAGAGTCGCTGTCGAAGTCAGTGTATTCCAAACCCAAATCAAGATTTGGTGAACAACCTTATCCTGTTGATGCCACATTCTTTGAGGATAACATTGATTTCACATTGCAAGAACAGTTGGCTGTTAATTCACCATATGGGAACTCCTTCAATAAGGGTTCACCAAATACCAAATCCAGGATTGTTAATAGAACAGCTTCCATAACTTCTTCCACCATCACTCCCAAGACTCCCTTCATGTCATCTCCAGGGCCAGCTGGGGAGGATGAGGATGAAATCTTCTATGGGAAAGTTGAATTGTGTAAAGGGAGGCGCAAGAGAGTAACCACTAAGGTTTTGATCGAGTGGATTGTATTTGTATGCATTATGGGGTGCCTAGTGGTTAGCTTGACTGTTGATAAACTGAAAAACACAATCGTTTGGAGTTTGGAGTTTTGGAAATGGTGTGTGCTAGTGTTGGTGATCTTTTGTGGCATGTTGCTCACAAACTGGATAATGCACATCATTGTGTTCTTGATTGAACTGAACTTTTTGCTGAGGAAAAAGGTGCTATATTTTGTTCATGGACTGAAGAAGAGTGTTCAGGTCTTTATTTGGCTGGGTTTGATTCTTATCGCTTGGGTTCTGTTAATCAATCAAACTGCCCATCGATCTGAACTCACCACAAAAATTTTGAATGGTGTAACACAGACTCTTATTTCCCTTCTCATTGGAGTATTCTTATGGTTCTTTAATACATTGTCTATAAAGATATTAGCATCAAAATTCCATGTCAGATCTTTCTTTGATAGAATTCAAGAATCAATCTTTTATCAGTATGTTCTGCAGACACTGTCATGGCCTCCACTCATAGAGGAGGAAGAGAAGTTGAAGGTTTATCAGGAGCGCAAAGCATTGGCCCCTGCCTTGAGTGACATCAAAACAGGCGGGAAACAGCTAAGTAAGCTTGTGTCGGGGATTCAGGTGGTTGTGACCATAGTTGTGTGGCTTCTACTGATGGAGATTGCCACTACAAAAGTAATTTGGTTATTCTCATCACAGCTAGTACTCGTTGCTTTCATGTTTGGAAACTCATGCAATAACATATTTGAAGCTATCATCTTTGTGTTTGTGATGCACCCCTTTGACGTCGGTGATCCATGTGTGGTTGATGGTGTTCAGTGA 1419 0.4235 MDGVNRNQVPKPGEASMTGKKTANAGEVLVAISVQDSKVAECHDLNTGYAASKSPRLNGASPEIRFSPSPKKPPKHPLGNEHPVLRESLSKSVYSKPKSRFGEQPYPVDATFFEDNIDFTLQEQLAVNSPYGNSFNKGSPNTKSRIVNRTASITSSTITPKTPFMSSPGPAGEDEDEIFYGKVELCKGRRKRVTTKVLIEWIVFVCIMGCLVVSLTVDKLKNTIVWSLEFWKWCVLVLVIFCGMLLTNWIMHIIVFLIELNFLLRKKVLYFVHGLKKSVQVFIWLGLILIAWVLLINQTAHRSELTTKILNGVTQTLISLLIGVFLWFFNTLSIKILASKFHVRSFFDRIQESIFYQYVLQTLSWPPLIEEEEKLKVYQERKALAPALSDIKTGGKQLSKLVSGIQVVVTIVVWLLLMEIATTKVIWLFSSQLVLVAFMFGNSCNNIFEAIIFVFVMHPFDVGDPCVVDGVQ 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0711 472 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 11 372 IPR016688 -
Lele02g0711 472 MobiDBLite consensus disorder prediction 48 101 - -
Lele02g0711 472 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0711 Lele-ChrLele02 4304328 4307042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0711 331 471 Mechanosensitive Ion Channel Family AT5G12080 45.963 4.85e-36 139
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0711 02 4304328 4307042 Lele02g0711 02 4304328 4307042 ECH
Lele01g0729 01 4282368 4285019 Lele02g0711 02 4304328 4307042 ECH
Lele02g0711 02 4304328 4307042 Lele03g0727 03 4294136 4296787 hybridization
Lele02g0711 02 4304328 4307042 Lele04g0728 04 4460346 4462430 hybridization