Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0686 ATGTCAGCTCTTGAAGTCCTGAAGTTATTTGATACTGATGTTTCAGTTTCTGTTGAAAAGCTCAACAATTCTGGCAAATGGCAGTGGTTCTTTGACTTCTCTCCTAGTTTTCAGTCACAGCCATCGTGTTGTGTAAAAGGCCTTGAGCTATGCCAGAGATCTAGAAATGCCGTTTGGGCTACCATGGTTTGTGAGATGGAGAATGACTACATCGAGGAAATGGACATCGAAGTCCTCCACTCGATGTGGCCTGAAGATATTGGAACTGATCTCACAAATTATACAGATAAGGGATCTTCTCAACTCTCCCACCTTATGAAACACTTGGAGTATAAGCAGGCCAATGCCATGCCTCTTCTTAGAGAAGAACTCACCAACCTAAGCACACAGCGGCGCGAGGTTGAGCTGAGGAAGTTAGAGATATTGGAGGAGCATCGATTTGAAGAAGAATCATATGGGGACAAACGTTCAGTTTCCATTTTGGATGAAATATATGATTCATGGCAAGATGTACCGCGCAGGAAATGCAATGCAAGTGTTCAAAGAGAGCAGATACTTGCAGAGAAGTTGGAAGAAAGTATAAAGAATCTTGAAAAGCAGTCCTCACCTGTAGAAGAACTGTCCCAGATTCTGAAAAGAGCAGATAATTTCTTGCATTTTGTCCTCCATAATGCACCTGTGGTTATTGGTCATCAGGACAAAGAGTTGCGATATCGATTTATCTATAATCATTTTCCAAGTTTGCAAGAGGAGGACATCATTGGAAAAACAGATGTTGAAATTTTTACAGGATCTGGTGTTAAAGAATCTCAAGATTTCAAGAGGGAAGTTCTAGAAAAAGCCTTGCCTGCGAAAAGAGAAATTACTTTTGAGACAGAACTATTTGGGTCAAAGACATTCTTGATTTATGTAGAACCTGTCTTCAGCAAGACAGGGGAGACGCTAGGAATAAACTATATGGGAATGGATGTCACAGATCAGGTGATAAAGATCCGTGAAGAAATCGCGGTTCAGAAAACCAAGGAAACAGAACTGAATAAAACCATCCACATTACAGGAGATTTGGTTCTTCAACTTATAAATGGCATCCTTGATCTTTCCAAGGTTGAGTCAGGTCATTGGAGATGTTTTAAGGATTCGGAAATCCTCACAAATTTAATCAGCAACGCTATCAAGTTTACTCATGAAGGCAAGGTTGGTATAAATCTTTACGGTGTACCAGAGCCATCTTTTGCTAAAGCAGAAGTAAGCCTCCAGAAGACAAGTGCAGACCAGTCTAGTATTTCAGGAAATGGAGTAGAAGAGAAGTATCTCTCGACATCTCAAAATAGCAGTAACCAAAATCATGCATCAAGTGATGAAGATAGATATCCAGTTAAAAGCGAATGCTTAATGAATGAAGGTTCTGTGGAGCTACCTCACTCAACAGAAACAAGAGTGTGGATACGTTTTGATGTCTATGACTCAGGAATTGGGATACCAGAGAAGGCTATTCCTACTTTATTTAAAAGGGTTTCGACTCTTTGTGATCATTCTGATGAGTCCTCAGATACAGAGGATGATGATGATGATGATGCATCTAATGATGCCACAGAGGGTTTCTTCCAATTTCAACCCCCCACTTTGGGTTCTCTGTTCTCCTCCCATGGATCTAGCAGGACCCAAAACCCAGAGATAGAGAATGAAAATGTATATGCAAGAAACAGCTCACGAAGTGCAGATTCTTCATATCACAAGGAGGTAGATCAAGATCGGGCAGCAATAGCAACAATGTCAAAAGAACAAGCACATCAGTGTCAAGAAAGAGCTGAGATTTCCTCGCAATGCATCGCTAGCAGCAGTACTTCAGAAGTAGCAAAACCAAATTCAAAGCCCCAGATCCTTTTCTTTGAGGATAACAAGATCAATGTCATGGTGACACAGTCAATGATGAAGCAATTAGGTCATAGCATAGATGTTGTGAATAATGGAGTGGAAGCTGTACGAGCCGTTCAGCGCCAGAGTTATGACCTAATTCTTATGGATGTGTGCATGCCAGTTATGAATGGTCTGCAAGCAACAAAACTGATTCGTTCTTTTGAAGAAACGGGTAACTGGGATGCTGCAAGAGAAGCTAGAATTGAGCTAAATCTACCAGCTTCATGTTTGCAAAATGGTGAATTTTGTTTACCTGCCACTGAGTCGAACCACATCCCCATTATCTCGATGACAGCAAATGCTTTGTCAGATAGTGCTGAAGAGTGTTTTGCAAATGGTATGGACTCATTTGTATCAAAACCTGTGACTTTCCAAAAATTGAAAAACTGTTTTGAACAGTACTTACAGTGA 2328 0.4072 MSALEVLKLFDTDVSVSVEKLNNSGKWQWFFDFSPSFQSQPSCCVKGLELCQRSRNAVWATMVCEMENDYIEEMDIEVLHSMWPEDIGTDLTNYTDKGSSQLSHLMKHLEYKQANAMPLLREELTNLSTQRREVELRKLEILEEHRFEEESYGDKRSVSILDEIYDSWQDVPRRKCNASVQREQILAEKLEESIKNLEKQSSPVEELSQILKRADNFLHFVLHNAPVVIGHQDKELRYRFIYNHFPSLQEEDIIGKTDVEIFTGSGVKESQDFKREVLEKALPAKREITFETELFGSKTFLIYVEPVFSKTGETLGINYMGMDVTDQVIKIREEIAVQKTKETELNKTIHITGDLVLQLINGILDLSKVESGHWRCFKDSEILTNLISNAIKFTHEGKVGINLYGVPEPSFAKAEVSLQKTSADQSSISGNGVEEKYLSTSQNSSNQNHASSDEDRYPVKSECLMNEGSVELPHSTETRVWIRFDVYDSGIGIPEKAIPTLFKRVSTLCDHSDESSDTEDDDDDDASNDATEGFFQFQPPTLGSLFSSHGSSRTQNPEIENENVYARNSSRSADSSYHKEVDQDRAAIATMSKEQAHQCQERAEISSQCIASSSTSEVAKPNSKPQILFFEDNKINVMVTQSMMKQLGHSIDVVNNGVEAVRAVQRQSYDLILMDVCMPVMNGLQATKLIRSFEETGNWDAAREARIELNLPASCLQNGEFCLPATESNHIPIISMTANALSDSAEECFANGMDSFVSKPVTFQKLKNCFEQYLQ 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0686 775 MobiDBLite consensus disorder prediction 531 572 - -
Lele02g0686 775 Gene3D PAS domain 197 326 - -
Lele02g0686 775 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 381 512 IPR036890 -
Lele02g0686 775 Gene3D - 618 775 - -
Lele02g0686 775 SUPERFAMILY CheY-like 623 775 IPR011006 -
Lele02g0686 775 CDD REC_hyHK_CKI1_RcsC-like 627 768 - -
Lele02g0686 775 FunFam Histidine kinase 5 205 342 - -
Lele02g0686 775 MobiDBLite consensus disorder prediction 436 457 - -
Lele02g0686 775 Coils Coil 180 207 - -
Lele02g0686 775 SMART REC_2 625 770 IPR001789 GO:0000160
Lele02g0686 775 Pfam Response regulator receiver domain 627 694 IPR001789 GO:0000160
Lele02g0686 775 Gene3D - 327 526 IPR036890 -
Lele02g0686 775 MobiDBLite consensus disorder prediction 511 581 - -
Lele02g0686 775 PANTHER TWO-COMPONENT HISTIDINE PROTEIN KINASE 382 513 - -
Lele02g0686 775 MobiDBLite consensus disorder prediction 436 452 - -
Lele02g0686 775 MobiDBLite consensus disorder prediction 514 529 - -
Lele02g0686 775 FunFam Histidine kinase 5 619 775 - -
Lele02g0686 775 ProSiteProfiles Response regulatory domain profile. 626 774 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0686 Lele-ChrLele02 4121887 4127033 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0686 62 775 Histidine Kinase Gene Family AT5G10720 39.653 0.0 605
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele02g0686 HATPase_c 5.1e-06 CL0025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0686 02 4121887 4127033 Lele03g0698 03 4126595 4131236 hybridization
Lele02g0686 02 4121887 4127033 Lele04g0703 04 4259761 4264982 hybridization