Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0671 ATGGAGTTTTATTTTGTTCTACGAAGTCAACCGGAAGCATTTCAATTGAGCAAGCATGTGCTTCCCAGTCCCTTGACATCGTCAGCGAGATCATCGTTTCATTATTACTTTACCCATCTTCAAGCTCCACATCAACAGGAGAAGAACAATCACTGTTTATCGCTGCAGCTTGCATATAATTTGTCTAGCGCAGTGGTAGGTAGGACCCGTAACAGCAAAATGAGAGCTTTTCCCAAACAAACAATCATATTATTACTAGCTTTCTTTATCTTCTTCACCCACCTTTTCCAATCCCGTGCCTCAGGAGTCCCCCACCGTCACTGCAAAGCATGGCTCGTGCAATCCATTCCCACCGATATGCCTCATCTCTCCCGCGTTCCCGGCGTTCTCTCTACTGGGGATGTTCTCCGGTGGCTCGCGGCCAACTCTACTCGGCAACTCGACATAATTGCTCAGTACTGGCAGCTGGTGGCTTCTCCCAATGATCCTCGTTCTGGAGATTATGGCTACTCCGAAAGTGATATGCTTAAATTTGGCGCCCATGAAGGTGCTGCCGTTTATAACGCCATAGATGCTGCCGCTGATCGTAATGTTAGAATCAGGTTACTGTCTTACTCGGGAGTATATCCAGATTACACCACAGAACCATCTAAACTTGCTTCAGGAAGACCAAATGTTAAGAATGTGACCTTATTACTGGAAGATTGGTGGGGTTCGGGCATTGTTCATGCCAAAGTCTGGATATCAGATAATCGGGACGTATATATTGGATCCGCAAACAATGACTGGAAATCGCTTACTCAGGTTAAGGAAGTTGGAATCTATCTTACTGGTTGCCCAAGAATAGCTGAAAGTGTCAAGGTCTACTTCAACAATTTATGGAAACTCGCATCTCTTAATTCTTCAGCTTACACTAAAACAGTATTTGATCAACAGTGGCAAGTTGAAAGAAAGGTTCCTTGTTGGTCTCATTTCATTGACCCAAAAAAGAGATGCGAGTCTCCTCTTCCTGGGTACGTAAAGACTCCCGATGTTGCAGGATATCCTGTTCTTTCTGATCCCTATATGTTTAAAGTTTCAATTGAAACTCCTGGAAGTAACTGTTCAACAGAGCTCCCCCAAGCTAGCTATCTCTCCTTCGCTCCTCCTGAGCTGTCATTTGGCAAGTATCAGGCTGATGAACAGGCTTGGGTTGATACAATTAAATCAGTTGGAATGAAGGATACTGTTAGAATCAACACCATGGACTGGTTGGGTCAGTCACAATATACTGACCAAACTGTTTACTGGTCATCCCTGTCCTCTGCGATATCAGAGCATGCAACAGTCAAAATATTGGTGGCATATTGGAGTCACTTCATCAATAGCACAGATGTGTACCTGAAGTCTCTCCTCTTCTCCAACAATCTCTGCTCATCTTCAAAGTACAATAAGTGTTCTGGAAAAGTTGAGATCAAGTACTATATGGTTCCAGGTTTCAATTCGACAGGGCCTGCCATTAAGGACGGTGCTGGTACAGGAAATACATACCCTGGCTTTACGAGGGTCAATCATGGAAAATATGCAGTTTCTGACGCACGAGCTCATATTGGAACTAGCAATCTCGTATGGGACTACTTTTATACCACATCAGGAGTCAGCTTTGGGACACACAACCCTGCCATTGTTTCACAACTTCAGCAGATTTTCGATGCTGACTGGCATTCACCTTACTGTGTCCCAGTTGAAAAACTGGAACAACGCTTTTCTTCTGCATCCTAG 1761 0.4424 MEFYFVLRSQPEAFQLSKHVLPSPLTSSARSSFHYYFTHLQAPHQQEKNNHCLSLQLAYNLSSAVVGRTRNSKMRAFPKQTIILLLAFFIFFTHLFQSRASGVPHRHCKAWLVQSIPTDMPHLSRVPGVLSTGDVLRWLAANSTRQLDIIAQYWQLVASPNDPRSGDYGYSESDMLKFGAHEGAAVYNAIDAAADRNVRIRLLSYSGVYPDYTTEPSKLASGRPNVKNVTLLLEDWWGSGIVHAKVWISDNRDVYIGSANNDWKSLTQVKEVGIYLTGCPRIAESVKVYFNNLWKLASLNSSAYTKTVFDQQWQVERKVPCWSHFIDPKKRCESPLPGYVKTPDVAGYPVLSDPYMFKVSIETPGSNCSTELPQASYLSFAPPELSFGKYQADEQAWVDTIKSVGMKDTVRINTMDWLGQSQYTDQTVYWSSLSSAISEHATVKILVAYWSHFINSTDVYLKSLLFSNNLCSSSKYNKCSGKVEIKYYMVPGFNSTGPAIKDGAGTGNTYPGFTRVNHGKYAVSDARAHIGTSNLVWDYFYTTSGVSFGTHNPAIVSQLQQIFDADWHSPYCVPVEKLEQRFSSAS 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0671 586 SUPERFAMILY Phospholipase D/nuclease 140 296 - -
Lele02g0671 586 Gene3D Endonuclease Chain A 375 569 - -
Lele02g0671 586 SUPERFAMILY Phospholipase D/nuclease 390 581 - -
Lele02g0671 586 CDD PLDc_vPLD3_4_5_like_1 112 279 - -
Lele02g0671 586 CDD PLDc_vPLD3_4_5_like_2 377 568 - -
Lele02g0671 586 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 513 539 IPR001736 GO:0003824
Lele02g0671 586 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 238 265 IPR001736 GO:0003824
Lele02g0671 586 Pfam PLD-like domain 182 294 IPR025202 -
Lele02g0671 586 Gene3D Endonuclease Chain A 131 298 - -
Lele02g0671 586 PANTHER PHOSPHOLIPASE D - RELATED 81 581 - -
Lele02g0671 586 SMART pld_4 513 539 IPR001736 GO:0003824
Lele02g0671 586 SMART pld_4 238 265 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0671 Lele-ChrLele02 4029613 4033130 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0671 02 4029613 4033130 Lele25g0674 25 4256202 4258206 CCT
Lele02g0671 02 4029613 4033130 Lele26g0682 26 4349839 4351835 CCT
Lele02g0671 02 4029613 4033130 Lele27g1415 27 20425467 20427467 CCT
Lele02g0671 02 4029613 4033130 Lele28g0666 28 4258456 4263795 CCT
Lele02g0671 02 4029613 4033130 Lele02g0671 02 4029613 4033130 ECH
Lele02g0671 02 4029613 4033130 Lele03g0678 03 4023655 4027156 hybridization
Lele02g0671 02 4029613 4033130 Lele04g0685 04 4167101 4170369 hybridization