Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0664 ATGTTGAAGTCAGATCTTGCAAAGTATTTTAGGAACACGAAAAAGACAAAAGTGCAAAAGGAGTCGGTTCAATTCGGCTATTTCGAGTACTTCGATGGAGTGAAGCAGCGGAGCCCGGTGGAGGGTCGTCAAAGATCCAGGGAAAGTGACCCACGTTCAGTACCGATGGCATCTGCGGACAAAGAGCTCGAAGAGCAGCTCCTTGAAGCTGGAAATAAGCTCGTAGATCCTCCGCCTTCTGTCGAAGAGCTCCTGCCCCTTCTTGATCAAATTGAGAGTTACCTATCAACGGTTGAACAGTCTCCAACAAAATCTATGCAAGACGCACTCTCACCATCACTGAAGGCATTAATTGCTGATAAACTTTTGAGGCATTCAGATGATGATGTGAAAGTTGCGGTAGCCTCTTGCATCAGCGAAATAACAAGGATAACTGCTCCTGATGCTCCTTATGACGATGATCAAATGAAGGAGGTGTTTCAATTAATTGTATCTTCATTTGAAAATCTATATGATACATCAAGCCGATCATATGCTAAGAGAACATCCATTATTGAAATTGTTGCAAAGGTCAGATCGTGTGTGGTAATGCTAGATCTTGAGTGTGACGGGCTGATTGTAGAGATGTTTCAGCATTTCTTTAAGGCTGTTAGGGAACATCATCCAGAAAATGTTTTATCATCCATTGAGACTATTATGACCCTTGTCATAGAGGAAAGTGAAGAGATATCTATGGACCTGCTTTCTCCAATCTTAGCCAGTGTGAAGAAAGACAATGAGGAATTTTCTCCAAATTCTCAAAATTTGGGGGAGAAAGTCCTGGAATGTTGTGCTACAAAGCTTAAACCATACTTAGTGCAAGCAGTGACCACCTTGGGCATTTCTTTAGATGATTATAGCAAGGTACTTGCTTCTATATGTCAAGAGACATCTGGCAGCTTGGAGCAAAATGATGCATGTGCTTCCAGGGAAAATGCGGCAGATGAGGGAAAGTCTGCAAAAGCAACGTTGAATGAGTCAAAACAGGTGATTGAAGAGGATGCTGAAAAAGCTACCCCTCCTCAGCAAGTCACTGTTGTTGATGGCACGTCTTCTAAGTCTGTCATGAGCAAATGCATTGTGCAGTCCAGTGAAGGTGACTTGTTGGAAGTACCAAAGTCCCTAAAGAAGCAAGAAGATGGAAATAATTCTGATCACTCTAAAGGTGTGAATATATCAAGTAATGAGGATCCCGATAATGTCAGCACTAAAAGAGTTGACAACACAGAAAAAAAGCCAGAAAAAGCCACCAAGAGGAGAAGAAAACAATATCATTCTACAGACTCGGCAGAACCTTCTGAGGGTTCAGCTGTTGCTCATGGCAGGGATGCTGAGAAAATGCTTGACTCTAAAAGTAACAAGAAGTACCTTTCTAGTTCACTTTATGAAAAGCGCTCTACTCAGGTTGCAGGACCTTCAGATAATGACAAGGAGAGTCATGCTAAGATTTCATCAGGAAAGGTAGGAATTAATGAGTCTGAAGCGGCGGCTTCTCCTTCTCCCAGTGAAAGCCATCCTGATGAAATTCGTTCCAAAAAACCTGGAAGACCAAATAAGAAAGGAAGGCCTGCCAAAGAAGTGGTAATTTCCTCTGAGGATGTTACCAAAAAGGTGTCAGAAGTAACAAGCGATTCAGATGCAAAACCTACCAATCGGTCTGCCAAGAAGGTGCCTGGTGGGAGCTCTGATGGGAAAAAAGCTAATGTGGTAGATTCAGTTGAAAAAAGAAGCAGGAGTAAAAGTGATCCAGAGGGCAAAAGGCGGTCAGCTAAGAAAGAAGGTGGGACCAATAAGGGTGTTGAATCCTCTTCGAAGCACCTGAAGGAAAATAAAAGGCAGAAGCAGGGCAAAGTCTCTGATTTGGATGCAGCAAAATCTGCTAAAGATGAAGAAAAGGAAACAGTAACTTCACCAAAGTCGGGTGCGAGATTGATTGAAGATGAACAATGTTTAGAGGAAACGCCCAAGACCAATTTGAAGAGGAAACCTACTCCAGGTCCAGGAAAAGAAAATAAGTCTGATATCAAGGTATATGGTGAAAATCTTGTTGGTTCACGGCTTAAAGTTTGGTGGCCAGAAGATCGTGAGTTTTACAATGGTATCATTGAGTCCTTTGATTCTGCCAAAAAGAGGCACAAGGTTGCATACGATGATGGTGATATAGAAATATTAAATCTTAGAAAGGAAAAATGGAAGCTTGTTCAGGAAGGAGATGATCATGCAAGCCCTGATGTTTCAGCTGATATGCCCTCAAATAAGAAAAGGAAAAGAAGTACTGGTCAGTCAACTAAGGGAAGAAATACGGATACTCCTACCAAGAGTGGAGGATCTTCATCAGGCAAATCAAAGGGTGCGTCCACAATGTCTGGCCATAAGTCGAAAGATGGTAGCAAAGTTGATGGCAAATCCAAAGATTCCAAGACTATTGGCAAATCGGAGGATGGGATTCGTAGAAGATATAAGGATCGTACTTCGAGAAGTGGTGCCACTAAATCTGCGGATGCTGCACCAGTAAAGACTGAATCTGATTATGATATTGAGACTCCCAAGACCAGCAAATCAAAGAGCGATTCCAAGACCAAGCAAGAAACCTCAAAAAAAACCAAGAAAGAAACATCAAGTACTCCTGCTTCTAAGGGGAGACCCCCCAAAAGTGGTGGGAAGTATAATGTTAATGCCACTGGCAAGGTCAAATCTGGTTCTTCATCAAAGACAAAAGATGCTACGAATGAATTCCCGGCAGATTCAACAGAAAAGGCAAAAGACACGAAGGGTAAGGCATCAAGTTCATCCAAGGCGCAAGGAAGTGCTACTGCCAAGGCTGGAAAGAAACGTCAGAGAGGCTAG 2886 0.4255 MLKSDLAKYFRNTKKTKVQKESVQFGYFEYFDGVKQRSPVEGRQRSRESDPRSVPMASADKELEEQLLEAGNKLVDPPPSVEELLPLLDQIESYLSTVEQSPTKSMQDALSPSLKALIADKLLRHSDDDVKVAVASCISEITRITAPDAPYDDDQMKEVFQLIVSSFENLYDTSSRSYAKRTSIIEIVAKVRSCVVMLDLECDGLIVEMFQHFFKAVREHHPENVLSSIETIMTLVIEESEEISMDLLSPILASVKKDNEEFSPNSQNLGEKVLECCATKLKPYLVQAVTTLGISLDDYSKVLASICQETSGSLEQNDACASRENAADEGKSAKATLNESKQVIEEDAEKATPPQQVTVVDGTSSKSVMSKCIVQSSEGDLLEVPKSLKKQEDGNNSDHSKGVNISSNEDPDNVSTKRVDNTEKKPEKATKRRRKQYHSTDSAEPSEGSAVAHGRDAEKMLDSKSNKKYLSSSLYEKRSTQVAGPSDNDKESHAKISSGKVGINESEAAASPSPSESHPDEIRSKKPGRPNKKGRPAKEVVISSEDVTKKVSEVTSDSDAKPTNRSAKKVPGGSSDGKKANVVDSVEKRSRSKSDPEGKRRSAKKEGGTNKGVESSSKHLKENKRQKQGKVSDLDAAKSAKDEEKETVTSPKSGARLIEDEQCLEETPKTNLKRKPTPGPGKENKSDIKVYGENLVGSRLKVWWPEDREFYNGIIESFDSAKKRHKVAYDDGDIEILNLRKEKWKLVQEGDDHASPDVSADMPSNKKRKRSTGQSTKGRNTDTPTKSGGSSSGKSKGASTMSGHKSKDGSKVDGKSKDSKTIGKSEDGIRRRYKDRTSRSGATKSADAAPVKTESDYDIETPKTSKSKSDSKTKQETSKKTKKETSSTPASKGRPPKSGGKYNVNATGKVKSGSSSKTKDATNEFPADSTEKAKDTKGKASSSSKAQGSATAKAGKKRQRG 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0664 961 MobiDBLite consensus disorder prediction 518 556 - -
Lele02g0664 961 MobiDBLite consensus disorder prediction 581 650 - -
Lele02g0664 961 SUPERFAMILY Tudor/PWWP/MBT 694 733 - -
Lele02g0664 961 MobiDBLite consensus disorder prediction 806 841 - -
Lele02g0664 961 MobiDBLite consensus disorder prediction 398 412 - -
Lele02g0664 961 Pfam Sister chromatid cohesion protein PDS5 protein 83 287 - -
Lele02g0664 961 SUPERFAMILY ARM repeat 82 324 IPR016024 -
Lele02g0664 961 MobiDBLite consensus disorder prediction 451 465 - -
Lele02g0664 961 MobiDBLite consensus disorder prediction 383 397 - -
Lele02g0664 961 MobiDBLite consensus disorder prediction 658 687 - -
Lele02g0664 961 MobiDBLite consensus disorder prediction 314 364 - -
Lele02g0664 961 MobiDBLite consensus disorder prediction 466 487 - -
Lele02g0664 961 FunFam Binding protein 691 743 - -
Lele02g0664 961 MobiDBLite consensus disorder prediction 383 687 - -
Lele02g0664 961 MobiDBLite consensus disorder prediction 851 887 - -
Lele02g0664 961 MobiDBLite consensus disorder prediction 747 961 - -
Lele02g0664 961 Gene3D - 693 744 - -
Lele02g0664 961 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 412 950 IPR039776 GO:0007064
Lele02g0664 961 MobiDBLite consensus disorder prediction 924 939 - -
Lele02g0664 961 MobiDBLite consensus disorder prediction 776 805 - -
Lele02g0664 961 MobiDBLite consensus disorder prediction 747 768 - -
Lele02g0664 961 MobiDBLite consensus disorder prediction 413 427 - -
Lele02g0664 961 MobiDBLite consensus disorder prediction 905 923 - -
Lele02g0664 961 MobiDBLite consensus disorder prediction 36 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0664 Lele-ChrLele02 3985680 3995398 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0664 02 3985680 3995398 Lele03g0674 03 3970854 3981883 hybridization
Lele02g0664 02 3985680 3995398 Lele04g0678 04 4120757 4134574 hybridization