Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0663 ATGGCAAAGTGTTGCCGGAACAACGTCGGACCCCTGATTCTCGATCGCCACGATCCTACTACGAATGCAAATGTCGGTGGCCACTTCCGGCTCTGGAATGCGCTCTCGGCTTCCTCATTCCGTCGTATCATTTTTGACGCCGTGAGCTGCGGCGGCAGCTCCCGTTATCAACACTCCCACTGTGACGACTTCAGCTCCACCGCCTCAACCACGACATCAACCTCTGGGAACTCGAAGGAGAAGCACCGAGAACAGAGGCAGGGACCATCCGAGTCTAAGCGTAGCTCCAATGGGAGGTCCGAAAAACTATCGGATCTTCTGCTTATAACAGCCTCCGAGAATCGTGCCGAAACGAAAAAGAAGGAAGAGGCGTTGGAGGAGCTGAAGCAAATTGTGCAGGAGTTGCAAGGAGAGGACCTGACGAAGCGGCAAGTGGCAGCATCAAATGTTAGATTGCTCGCCAAGGAAAACTTGCAAGTCAGAGGGACTCTGGCAATGCTTGGAGTCATTCCTCCTCTGGTCGGAATGCTTGACTTGGAAGACGTTAACTCTCAAATCGCTTCTCTGTATGCGTTGCTCAATCTCGGGATCGGCAACGATGCAAATAAAGCAGCCATTGTCAAAGTTGGCGCTGTTCACAAGATGCTAAAGCTCATTGAATCTCCTACTGCTCTGGATTCATCAGTCTCTGAAGCCATTGTTGCAAATTTCCTTAGCTTGAGTGCTTTAGATTCAAACAAACCAATTATTGGATCCTCTGGTGCAATCCCTTTCCTGGTTAGAGTCCCTAAAAATTTAGACAATACATGTAGCCCTCAAGCTAAGCAAGATGCTCTTCGAGCACTGTACAATCTTTCAATCCTCCCAACCAATATCTCACTCATTTTGGAAACCGATTTGGCTCCACATCTGATAAACACAATAGGAGACATGGAGGTGAGTGAAAGAGTCCTTCCCATCTTGAGTAATCTGGCATCAACGCCAGAGGGCCGAAAAGCAATCAGTGCTGTGCCAGACGCATTCCCAATTCTGGTTGATGTATTAAACTGGACAGATTCACCAGGATGCCAAGAGAAGGCCTCCTACATTTTGATGATTATGGCACACAATGCTTATTATGGTGACAGGCAAGCCATGATTGAAGCTGGGATTGTATCATCATTGCTTGAGTTGACACTACTGGGTACCCCATTGGCACAAAAAAGAGCCTCAAGGATATTGCAGTGTCTGAGAGTAGACAAAGGCAAGCAGGCTTCTGGGAGTTGCAGTGGAAACTTGCATGCAAATGTCTCTGCTCCTATGTGTGGTGGCTCTTCATCATCTAGTACAAAGCCACATGGAGATGGTAGAAGGTATGTGGAAGGAGATGAAGATATGATGAGTGAGGAGAATAAAGCAGTGAAACAATTAGTGAGACAGAGTTTGCAGAATAACATGAGGAAAATTGTAAAGAGGGCTAATATCCCTCAGGTGTTCGTTCCATCAGAACATTTTAAGTCACTCACTTCAAGTTCGACTTCAAAGAGCCTGCCGTTTTGA 1539 0.4704 MAKCCRNNVGPLILDRHDPTTNANVGGHFRLWNALSASSFRRIIFDAVSCGGSSRYQHSHCDDFSSTASTTTSTSGNSKEKHREQRQGPSESKRSSNGRSEKLSDLLLITASENRAETKKKEEALEELKQIVQELQGEDLTKRQVAASNVRLLAKENLQVRGTLAMLGVIPPLVGMLDLEDVNSQIASLYALLNLGIGNDANKAAIVKVGAVHKMLKLIESPTALDSSVSEAIVANFLSLSALDSNKPIIGSSGAIPFLVRVPKNLDNTCSPQAKQDALRALYNLSILPTNISLILETDLAPHLINTIGDMEVSERVLPILSNLASTPEGRKAISAVPDAFPILVDVLNWTDSPGCQEKASYILMIMAHNAYYGDRQAMIEAGIVSSLLELTLLGTPLAQKRASRILQCLRVDKGKQASGSCSGNLHANVSAPMCGGSSSSSTKPHGDGRRYVEGDEDMMSEENKAVKQLVRQSLQNNMRKIVKRANIPQVFVPSEHFKSLTSSSTSKSLPF 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0663 512 Coils Coil 111 141 - -
Lele02g0663 512 MobiDBLite consensus disorder prediction 77 100 - -
Lele02g0663 512 SUPERFAMILY ARM repeat 127 413 IPR016024 -
Lele02g0663 512 MobiDBLite consensus disorder prediction 60 100 - -
Lele02g0663 512 Gene3D - 268 423 IPR011989 -
Lele02g0663 512 MobiDBLite consensus disorder prediction 433 453 - -
Lele02g0663 512 Gene3D - 110 267 IPR011989 -
Lele02g0663 512 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 25 512 - -
Lele02g0663 512 MobiDBLite consensus disorder prediction 60 76 - -
Lele02g0663 512 SMART arm_5 157 197 IPR000225 GO:0005515
Lele02g0663 512 SMART arm_5 199 242 IPR000225 GO:0005515
Lele02g0663 512 SMART arm_5 243 287 IPR000225 GO:0005515
Lele02g0663 512 SMART arm_5 288 326 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0663 Lele-ChrLele02 3981105 3983011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0663 108 411 U-box Gene Family AT2G23140 32.353 1.56e-33 132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0674 25 4256202 4258206 Lele02g0663 02 3981105 3983011 CCT
Lele26g0682 26 4349839 4351835 Lele02g0663 02 3981105 3983011 CCT
Lele27g1415 27 20425467 20427467 Lele02g0663 02 3981105 3983011 CCT
Lele02g0663 02 3981105 3983011 Lele25g0663 25 4168417 4169067 CCT
Lele02g0663 02 3981105 3983011 Lele26g0672 26 4273050 4273694 CCT
Lele02g0663 02 3981105 3983011 Lele27g1424 27 20507647 20508298 CCT
Lele02g0663 02 3981105 3983011 Lele28g0656 28 4187695 4188339 CCT
Lele02g0663 02 3981105 3983011 Lele03g0673 03 3968328 3970189 hybridization