Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0649 ATGATACTCTTATATACGAGCATACTAGAGAGCAAATTCCCAATACAAGACATCTATGTTCTATCCTGCAACTGCTGCACCAGAGTCAGCCACCTACGGATCCACTCTCTCTCCTCCCCTCTTCCTGCGCGCTTCTTTTTCCCGTCGGTTCTCTCGCCAATAGAAGTCTTGGCAATCAGGCATGGAGTAATGGCCTCCCATAATCAACAACAGCTATCACCCCACCATTTTTCCGACTCCGATCGACCCAATTCCCTGACCCACCCCCTCCTCCATTCCAACTATTCTCACCACTCTCACACTCACAACAATTCCTCCGACGTTCCCAGCAATCTCGACGCCACCAATTTCCTCCACCTCTACGCTACGGCCCCGTCTGACTCTACCGCAGCTGCTCCGCACCGCCCGATCCTCCGCCCTGACCACACTCACGTCATTGACGACGTCGCTGGGAACTCCCTCATCGACGGTGCTGCCTTGTCCCACGAGTCCGCCGATTTGAATATGGCTTCGGGCGACAACCCCAGTGCGAAGAGCGAGGTGGGTGTGGAGGACGGCGAGGAAAGGTTGGGCAAGTGGGAGAATGCGAGCTCTAAGGCGGAGATTCTATCGCATCCTCTGTACGAACAGCTGCTGTCTGCACACGTGGCATGTTTGCGGATCGCCACGCCCGTTGACCAGTTGCCGAGGATTGACGCTCAACTAGCGCGGTCCGAGAATGTGGTGGCCAAGTACTCAGCTTTGGGACATGGAGCACACGGCATGGTTGGGGATGAGAAGGGACTCGATCAATTCATGTCGCATTATGTTCTGTTGCTCTGTTCCTTCAAAGAACAACTCCAACAACATGTTCGGGTTCATGCAATGGAAGCAGTCATGGCATGTTGGGAGATAGAACAAGCCTTACAAAGTCTAACAGGAGTTTCACCTGGAGAAGGTACAGGGGCTACCATGTCTGATGACGAAGAAGACCAAATAAACAGTGATGGCAATCTTTTTGATGGTGCTTTTGATGGTTCAGACAGCATGGGATTTGGCCCTCTTGTTCCAACAGAGAATGAGAGATCCCTCATGGAGCGAGTTCGGCAAGAGTTGAGACATGAACTGAAACAGGGCTATAAGGATAAAATTGTGGACATAAGAGAAGAAATTTTGCGCAAGAGACGAGCAGGGAAACTTCCTGGCGATACCACCTCTGTCCTCAAGGCTTGGTGGCAGGCCCATTCCAAGTGGCCTTACCCTACTGAGGAAGATAAGGCAAAGTTGGTACAGGAAACTGGTTTGCAATTGAAACAGATTAATAATTGGTTCATCAATCAAAGGAAGAGGAACTGGCAGAGCAATGCTTCAACTTCTACAGTCTCCAAGAGCAAGCGGAAAAGGGGATAA 1389 0.5097 MILLYTSILESKFPIQDIYVLSCNCCTRVSHLRIHSLSSPLPARFFFPSVLSPIEVLAIRHGVMASHNQQQLSPHHFSDSDRPNSLTHPLLHSNYSHHSHTHNNSSDVPSNLDATNFLHLYATAPSDSTAAAPHRPILRPDHTHVIDDVAGNSLIDGAALSHESADLNMASGDNPSAKSEVGVEDGEERLGKWENASSKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLARSENVVAKYSALGHGAHGMVGDEKGLDQFMSHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQALQSLTGVSPGEGTGATMSDDEEDQINSDGNLFDGAFDGSDSMGFGPLVPTENERSLMERVRQELRHELKQGYKDKIVDIREEILRKRRAGKLPGDTTSVLKAWWQAHSKWPYPTEEDKAKLVQETGLQLKQINNWFINQRKRNWQSNASTSTVSKSKRKRG 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0649 462 FunFam homeobox protein knotted-1-like 3 isoform X1 385 446 - -
Lele02g0649 462 MobiDBLite consensus disorder prediction 169 188 - -
Lele02g0649 462 ProSiteProfiles ELK domain profile. 364 384 IPR005539 GO:0003677
Lele02g0649 462 ProSiteProfiles 'Homeobox' domain profile. 384 447 IPR001356 GO:0003677
Lele02g0649 462 SMART KNOX1_2 196 240 IPR005540 GO:0003677|GO:0005634
Lele02g0649 462 SMART HOX_1 386 451 IPR001356 GO:0003677
Lele02g0649 462 SMART KNOX2_2 252 307 IPR005541 GO:0003677|GO:0005634
Lele02g0649 462 Pfam KNOX1 domain 199 238 IPR005540 GO:0003677|GO:0005634
Lele02g0649 462 SMART ELK_2 364 385 IPR005539 GO:0003677
Lele02g0649 462 CDD homeodomain 387 448 IPR001356 GO:0003677
Lele02g0649 462 Gene3D - 383 459 - -
Lele02g0649 462 Pfam Homeobox KN domain 404 443 IPR008422 GO:0003677|GO:0006355
Lele02g0649 462 SUPERFAMILY Homeodomain-like 386 449 IPR009057 -
Lele02g0649 462 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 116 447 - -
Lele02g0649 462 Pfam KNOX2 domain 256 306 IPR005541 GO:0003677|GO:0005634
Lele02g0649 462 MobiDBLite consensus disorder prediction 69 109 - -
Lele02g0649 462 Pfam ELK domain 364 385 IPR005539 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0649 Lele-ChrLele02 3869816 3872766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0649 146 461 Homeobox Transcription Factor Family AT5G25220 76.101 2.35e-174 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-KNOX Lele02g0649 KNOX2 7.4e-19 No_clan