Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0623 ATGTTTGAGTTGACTCTTTATGCTCCAGGTCGATCGTTCTTCAAGTTTCCTTCCTCAATTCCCATCTCGCTCCACGGAATGTTGCATTTGCTGCACGGGACGCTTCATGTTGTCATATATGAGGTCGACAAGCTACATTCTGGACTCAACTTCAGACTCAACAACCAGGGTCCGAGAAACTTTGGGAAGAAAGTTCTTACCCGAGTTAAGAGTGCTTTGCGATTCAAGCCTCAGATTGGTAGAACTATGATGTATGCAACTGTCGATTTAGATAAAGCAAGAGTTGGGCGAACAAGAATGATACGCCAAGCCTCTAAACCCAAATGGAATGAGACATTTCATATATACTGTGCCCATTCCATTTCTGAGATCATATTCACTCTCAAATATGATAATCCAATTGGAGCAACTCTGATTGGAAGAGCTCACGTACCTGTTGAGCAAGTCCTCAAGGGCAACATAGTAGAAACCTGGGTTGCTATATTGGACGAGGATCGTCGTCCCATACAAGGTGGCTCTAAAGTTCGTGTCAGAATGCAGTTCTTCGATGTTACTAGGGATGTAACTTGGTCTCAAGGAATCAAGAGCCCGCGAAATGCCGGTGTTCCTCATACGTTCTTTACTCAGAAAGTTGGCTGCAAGGTTACTCTGTACCAAGATGCTCATGTCCCAAATGGTTATCTTCCTAGGATTCCTTTGTCTGAAGGAAGATATTATGAACCTAGTAGATGTTGGGAGGATATTTTCAACGCAATCACAAATGCTAGGCACTTGATTTACATAACCGGGTGGTCTGTTTACACTGAAATAACCTTAGTGAGAGACCCAAGGAGGCCAATTTCTGGTGGAAACATGACCCTTGGGGAACTTCTCAAGAAGAAAGCTGACGAAGGTGTCAATGTTCTTATGCTTGTGTGGGATGATAGAACTTCTGTTACAGAGCTGAAGAAAGATGGTTTAATGGCAACCCATGATGAAGAAACACACGAGTATTTCAAGAACACAAAAGTGAAGTGTGTGCTGTGTCCACGTAACCCAGATGATGGGCGTAGCATAATCCAAGGTTTTGAGATTTCAACAATGTTCACTCATCATCAGAAGACAGTGGTTGTTGACAGTGAAGTTCCTGGTGGAGGATCTCAGAGAAGAAGGATTGTGGGTTTTATTGGTGGGATTGATCTGTGTGATGGAAGATATGACACACAAGAACATCCTCTGTTTTCAACTCTAAACACAATCCATAAGGATGATTTCCATCAGCCAAATTTCCCAGAAGCTTCAATCAAGAAAGGAGGCCCAAGAGAGCCATGGCATGATATTCACTGCAGGTTAGAAGGACCAGTGGCTTGGGATGTCTTGTTCAACTTTCAACAAAGGTGGGAGAAGCAAGTTGGGAAGCAATTCCTACTCCCAACTAGACTTCTTGATCAGATCCTCTTACCTCAATCTTATACGACAACATCTAATGACAGAGATTCATGGACTGTTCAATTGTTCAGATCCATTGATGGTGGTGCAGCCTCTGGCTTCCCTCAAGACCCATCTAAAGCATCTGAATTAGGCCTTGTCAGTGGAAAAGATAACATCATTGACAGAAGTGTTCAAGATGCTTACATAAATGCCATTAGGCGGGCCAAGAACTTCATCTACATTGAAAACCAGTATTTTCTGGGTAGCTCATATGGTTGGAAAGATTCTGACATAAAAGTTGAAGATATCGGGGCTCTGCATGTTATACCAAAGGAACTATCACTAAAGATTGTGAGCAAGATCGAAGCAGGAGAAAGATTTGCAGTGTACATCGTGATACCAATGTGGCCAGAAGGCATCCCTGAGAGTGGTTCAGTTCAAGCGATCTTGGATTGGCAAAGAAGAACAATGGAGATGATGTATACTGATATTGCTGCAGCCATTCAGAGAAAAGGAAACAGATCAGCCCACCCTCGAGATTACTTGACATTTTTCTGCCTCGGAAATCGAGAAAGTAAGAAATCTGGAGAATTTGTTCCTCCAGAGAAACCAGATCCTGATACTGATTACAGCAGAGCACAAAATGCCAGGCGCTTCATGATCTATGTTCATGCCAAGATGATGATAGTTGATGATGAATACATAATCATTGGCTCTGCAAACATAAACCAGAGATCAATGGATGGTGCAAGGGACAGTGAGATTGCAATGGGTGCGTTCCAACCATATCATCTTGCATCTTATGGCCCACCCAAAGGTCAGATATATGGGTTTAGACGAGCTTTATGGTACGAACATCTTGGGGATCCTGATGAAGGTGATCAAGCGTTTGATCATCCTCAAAATTGTGTGAAGCTTGTGAATTATCTTTCAGACCAGAACTGGGAAAAGTATTCAAATCAAATATTTGATCCACGAAGTTCATTCAACCACCTCATGCGTTACCCTATAGATATAACCAGAGAAGGGAATGTAACAAAACTACAAGAGTTTGAATTCTTTCCTGATACTAAGGCTTCTGTTCTGGGCTCCAAATCAAGCCTCCCTCCTATCCTCACCACGTAA 2535 0.426 MFELTLYAPGRSFFKFPSSIPISLHGMLHLLHGTLHVVIYEVDKLHSGLNFRLNNQGPRNFGKKVLTRVKSALRFKPQIGRTMMYATVDLDKARVGRTRMIRQASKPKWNETFHIYCAHSISEIIFTLKYDNPIGATLIGRAHVPVEQVLKGNIVETWVAILDEDRRPIQGGSKVRVRMQFFDVTRDVTWSQGIKSPRNAGVPHTFFTQKVGCKVTLYQDAHVPNGYLPRIPLSEGRYYEPSRCWEDIFNAITNARHLIYITGWSVYTEITLVRDPRRPISGGNMTLGELLKKKADEGVNVLMLVWDDRTSVTELKKDGLMATHDEETHEYFKNTKVKCVLCPRNPDDGRSIIQGFEISTMFTHHQKTVVVDSEVPGGGSQRRRIVGFIGGIDLCDGRYDTQEHPLFSTLNTIHKDDFHQPNFPEASIKKGGPREPWHDIHCRLEGPVAWDVLFNFQQRWEKQVGKQFLLPTRLLDQILLPQSYTTTSNDRDSWTVQLFRSIDGGAASGFPQDPSKASELGLVSGKDNIIDRSVQDAYINAIRRAKNFIYIENQYFLGSSYGWKDSDIKVEDIGALHVIPKELSLKIVSKIEAGERFAVYIVIPMWPEGIPESGSVQAILDWQRRTMEMMYTDIAAAIQRKGNRSAHPRDYLTFFCLGNRESKKSGEFVPPEKPDPDTDYSRAQNARRFMIYVHAKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGAFQPYHLASYGPPKGQIYGFRRALWYEHLGDPDEGDQAFDHPQNCVKLVNYLSDQNWEKYSNQIFDPRSSFNHLMRYPIDITREGNVTKLQEFEFFPDTKASVLGSKSSLPPILTT 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0623 844 Gene3D C2 domain 29 181 IPR035892 -
Lele02g0623 844 SUPERFAMILY Phospholipase D/nuclease 522 762 - -
Lele02g0623 844 Pfam Phospholipase D C terminal 764 835 IPR024632 -
Lele02g0623 844 CDD C2_plant_PLD 30 182 - -
Lele02g0623 844 Gene3D Endonuclease Chain A 234 485 - -
Lele02g0623 844 PANTHER PHOSPHOLIPASE D 29 834 IPR015679 -
Lele02g0623 844 SMART pld_4 689 716 IPR001736 GO:0003824
Lele02g0623 844 SMART pld_4 360 398 IPR001736 GO:0003824
Lele02g0623 844 Gene3D Endonuclease Chain A 506 730 - -
Lele02g0623 844 ProSiteProfiles C2 domain profile. 16 159 IPR000008 -
Lele02g0623 844 FunFam Phospholipase D 501 735 - -
Lele02g0623 844 PIRSF PLD_plant 23 844 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Lele02g0623 844 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 689 716 IPR001736 GO:0003824
Lele02g0623 844 Pfam Phospholipase D Active site motif 690 716 IPR001736 GO:0003824
Lele02g0623 844 Pfam Phospholipase D Active site motif 360 398 IPR001736 GO:0003824
Lele02g0623 844 SUPERFAMILY Phospholipase D/nuclease 185 469 - -
Lele02g0623 844 Pfam C2 domain 79 160 IPR000008 -
Lele02g0623 844 SMART C2_3c 34 158 IPR000008 -
Lele02g0623 844 FunFam Phospholipase D delta 235 477 - -
Lele02g0623 844 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 31 183 IPR035892 -
Lele02g0623 844 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 360 398 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0623 Lele-ChrLele02 3726860 3732513 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0623 29 844 Phospholipase D Gene Family (Wang group) AT3G15730 66.423 0.0 1123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0623 02 3726860 3732513 Lele03g0639 03 3749097 3753592 hybridization
Lele02g0623 02 3726860 3732513 Lele04g0642 04 3865140 3870871 hybridization