Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0600 ATGGCTTCTTGCGAATCATCACGAGTCGAAGCAAATATGTGTGAGATGGTTCAAGGGCCTATCATTGTAGGTGGTGGACCGTCTGGTTTAGCCGTTGCAGCCTGCCTCTCTCAACAACACCGAGTTCCTTCGCTTGTTCTTGAGAGGAGCGATTCTATTGCTTCTCTCTGGAAAACCAAAACCTACGATCGTCTCTGTCTTCATCTTCCTAAAGAATTCTGTGAGCTTCCATTAATGGGTTATCCTGAAGATTATCCTAAGTATCCTGACAAGTTCCAGTTCATCTCCTACTTGGAATCCTACGCCTCACGCTTCTCAATTCACCCGCGGTTCAACCAAAATGTTCATGATGCCCGGTTCGATCCCACCTCCAGGTTTTGGACAGTTCGAACTCAGGATTTCATCTACATTTCTAAGTGGATCGTTGTGGCCACCGGCGAGAATGCTGAACCCTTTATTCCTAAGTTTGTTGGGATGGAGATTTTTCATGGACCCATTCTTCACACCATCGATTACAGGTCTGGCAGTGATTACGAGAACAAGAAGGTTCTGGTCATAGGTTGCGGGAATTCTGGTATGGAAGTTAGCTTGGATCTCAGCAATCACAATGCAAAAACTCACATGGTTGCTAGAAACGCTGTTCATGTTCTCCCTCGAGAGATGTTTGGGTTCTCAACGTTCGGACTAGCTATGACCCTCCTTAAATGGATTCCTATAAAACTAGTAGACATGTTGATCTTACTTATGGCTTATATCATCATCGGAAGCATCGAGCAGTACGGCTTCCGGCGGCCCAAACTAGGCCCAATAGAGCAAAAATGCATCGCCGGAAGAAGCCCTGTTCTTGACGTCGGCACTCTAGCAGCGATCAGAGCCAGGAGAATCAAGGTGGAGGAGGGTGTGAAGGAGATAACGAGAACTGGCGCCAAAATGAAGAATGGACAAGAGAAGAAGTTCGATGCTATTATATTGGCAACAGGATACAAAAGTAATGTGCCTAGTTGGCTCAAGAGATGTGAATTTTTCACTGCGGACGGGGTGCCAAGAACTCCGTTTCCAAACGGATGGAAGGGAGGGAATGGATTGTATGCGGTGGGGTTCACGAACCGAGGGATCCTTGGAACCGCATCGGATGCCGTGAAGATCGCCAGTGACCTTGCTGACCAATGGAGGAGTGTGAAGGACCAGAACAAATCCGGTGATCCACGTATGATCCTAGCTTTTCATGAATGA 1233 0.472 MASCESSRVEANMCEMVQGPIIVGGGPSGLAVAACLSQQHRVPSLVLERSDSIASLWKTKTYDRLCLHLPKEFCELPLMGYPEDYPKYPDKFQFISYLESYASRFSIHPRFNQNVHDARFDPTSRFWTVRTQDFIYISKWIVVATGENAEPFIPKFVGMEIFHGPILHTIDYRSGSDYENKKVLVIGCGNSGMEVSLDLSNHNAKTHMVARNAVHVLPREMFGFSTFGLAMTLLKWIPIKLVDMLILLMAYIIIGSIEQYGFRRPKLGPIEQKCIAGRSPVLDVGTLAAIRARRIKVEEGVKEITRTGAKMKNGQEKKFDAIILATGYKSNVPSWLKRCEFFTADGVPRTPFPNGWKGGNGLYAVGFTNRGILGTASDAVKIASDLADQWRSVKDQNKSGDPRMILAFHE 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0600 410 SUPERFAMILY FAD/NAD(P)-binding domain 180 392 IPR036188 -
Lele02g0600 410 PRINTS FAD-dependent pyridine nucleotide reductase signature 20 39 - -
Lele02g0600 410 PRINTS FAD-dependent pyridine nucleotide reductase signature 182 200 - -
Lele02g0600 410 PRINTS Pyridine nucleotide disulphide reductase class-II signature 19 41 - -
Lele02g0600 410 PRINTS Pyridine nucleotide disulphide reductase class-II signature 139 147 - -
Lele02g0600 410 PRINTS Pyridine nucleotide disulphide reductase class-II signature 178 202 - -
Lele02g0600 410 Pfam Flavin-binding monooxygenase-like 22 333 IPR020946 GO:0004499|GO:0050660|GO:0050661
Lele02g0600 410 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 21 395 - -
Lele02g0600 410 FunFam Flavin-containing monooxygenase 20 395 - -
Lele02g0600 410 Gene3D - 19 392 IPR036188 -
Lele02g0600 410 SUPERFAMILY FAD/NAD(P)-binding domain 21 214 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0600 Lele-ChrLele02 3604683 3606951 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0595 25 3787538 3789657 Lele02g0600 02 3604683 3606951 CCT
Lele26g0609 26 3890764 3892915 Lele02g0600 02 3604683 3606951 CCT
Lele02g0600 02 3604683 3606951 Lele02g0600 02 3604683 3606951 ECH
Lele02g0600 02 3604683 3606951 Lele04g0618 04 3747195 3749215 hybridization