Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele02g0592 | ATGGGGGTAGATTACTACGATATATTGAAGGTTGATAAAAATGCTACAGACGATGATCTAAAGAAGTCATATAGAAAGTTAGCCATGAAATGGCATCCTGACAAGAATCCTAACGACAAAAAAGAAGCTGAAGCCAAATTCAAACAGATCTCAGAAGCCTATGAGGCAAGAATTTCTTCTTATCAATTTATTTTGCCCTTATGTTTTATGAATGTACTAAGCGACCCTCAGAAGGGGATGATTTATGATCAGCACGGAGAAGAAGGTTTGAAAGATGTGCCACCGCCAGGGAGTGGACCATCAAGTGGGTTTAATCCCAGAAACGCGGAGGACATTTTTGCAGAATTCTTTGGGAGTAGCCCTTTTGGATTTGGATCATCTGGACCCGGCAAGTCCATGAGGTACCCGTCAGAAGGACCTGGAATATACGGTGGTTTTGGTGGAGGCGACAACATTTTTCGTACATACAATGAAGGCAAGCAAAAGCCAAAAAAGCCACCAGCTGTGGAGAGCAAATTGCCTTGCAGCCTGGAGGAGTTATACTCTGGATCCACAAGGAAAATGAAGATCTCAAGGACTATTGATTCCAATGGACGGCCAGTTACAGAAACACAGATATTGAGCATTGATGTAAAACCCGGGTGGAAGAAAGGTACCAAGATCACTTTCCCAGATAAAGGGAATCAACAATCAAATCAGCTGCCAGCTGACCTTGTGTTTGTGATTGATGAAAAGCCTCATGATCTGTACACGAGAGATGGGAATGACCTGATTGTGAGCCAAAGGGTGTCACTAGCAGAGGCAATAGGAGGAACAACGGTGAATCTCACCACACTTGATGGACGGAGCCTATCAATACCAGTGACTGATATTGTGAGCCCTGGTTATGAGCTTCTTGTTCCAGAGGAAGGAATGCCAATAACAAAGGAGCCTGGGAATAGGGGTGATTTGAAGATCAGATTTGAGGTTAAGTTCCCAACAAGGTTGACGCCAGAGCAACAAGCAGGCCTCAAACGAGCATTGGGAGGTTGA | 1032 | 0.4428 | MGVDYYDILKVDKNATDDDLKKSYRKLAMKWHPDKNPNDKKEAEAKFKQISEAYEARISSYQFILPLCFMNVLSDPQKGMIYDQHGEEGLKDVPPPGSGPSSGFNPRNAEDIFAEFFGSSPFGFGSSGPGKSMRYPSEGPGIYGGFGGGDNIFRTYNEGKQKPKKPPAVESKLPCSLEELYSGSTRKMKISRTIDSNGRPVTETQILSIDVKPGWKKGTKITFPDKGNQQSNQLPADLVFVIDEKPHDLYTRDGNDLIVSQRVSLAEAIGGTTVNLTTLDGRSLSIPVTDIVSPGYELLVPEEGMPITKEPGNRGDLKIRFEVKFPTRLTPEQQAGLKRALGG | 343 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele02g0592 | 343 | PRINTS | DnaJ domain signature | 42 | 62 | IPR001623 | - | |
| Lele02g0592 | 343 | PRINTS | DnaJ domain signature | 24 | 39 | IPR001623 | - | |
| Lele02g0592 | 343 | PRINTS | DnaJ domain signature | 78 | 97 | IPR001623 | - | |
| Lele02g0592 | 343 | PRINTS | DnaJ domain signature | 6 | 24 | IPR001623 | - | |
| Lele02g0592 | 343 | FunFam | Dnaj homolog subfamily b member | 164 | 245 | - | - | |
| Lele02g0592 | 343 | Pfam | DnaJ C terminal domain | 169 | 326 | IPR002939 | - | |
| Lele02g0592 | 343 | PANTHER | DNAJ HOMOLOG SUBFAMILY C MEMBER | 1 | 341 | - | - | |
| Lele02g0592 | 343 | Gene3D | DnaJ domain | 3 | 127 | IPR036869 | - | |
| Lele02g0592 | 343 | SMART | dnaj_3 | 3 | 78 | IPR001623 | - | |
| Lele02g0592 | 343 | CDD | DnaJ | 4 | 55 | IPR001623 | - | |
| Lele02g0592 | 343 | SUPERFAMILY | Chaperone J-domain | 3 | 127 | IPR036869 | - | |
| Lele02g0592 | 343 | Pfam | DnaJ domain | 4 | 55 | IPR001623 | - | |
| Lele02g0592 | 343 | Gene3D | - | 167 | 245 | - | - | |
| Lele02g0592 | 343 | ProSiteProfiles | dnaJ domain profile. | 4 | 86 | IPR001623 | - | |
| Lele02g0592 | 343 | SUPERFAMILY | HSP40/DnaJ peptide-binding domain | 250 | 334 | IPR008971 | GO:0006457|GO:0051082 | |
| Lele02g0592 | 343 | FunFam | DNAJ heat shock family protein | 246 | 341 | - | - | |
| Lele02g0592 | 343 | SUPERFAMILY | HSP40/DnaJ peptide-binding domain | 170 | 248 | IPR008971 | GO:0006457|GO:0051082 | |
| Lele02g0592 | 343 | CDD | DnaJ_C | 169 | 329 | - | - | |
| Lele02g0592 | 343 | Gene3D | - | 247 | 327 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele02g0592 | Lele-ChrLele02 | 3555994 | 3558085 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele02g0592 | 5 | 130 | C2H2 Transcription Factor Family | AT1G74250 | 31.298 | 8.02e-07 | 48.9 |