Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0586 ATGTCTGTGAAATCAGCTCAATCTTCATTTCGGGATCGAACACAAGAATTTCAGAGTATTGCGGAGAGGCTAAAGAAACCATTAACTTCAAGATCGAGGTTAAACGGGCCAAGCAGCAGTTCGAGTTCGGATGAACTGCGATCTAATGTTGCAATTCAATCAGAGTTCAATAGGAGGGCTTCCAAGATTGGATATGGAATACACCAGACGTCTCAGAAGCTCGATAAGCTAGCGAAGTTGGCAAAAAGGACTTCTGTTTTTGATGACCCGACAATGGAAATCCAAGAGCTTACTGCAATTATTAAGCAAGATATTACTGCATTGAACTCAGCCGTTGTGGATCTTCAGCTATTGAGCAACTCTAGAAATGAGAGTGGAAATATCTCTACCGACACAACTAGTCATTCAACCACAGTTGTGGACGACCTTAAAAATCGATTGATGGGTGCCACGAAAGAGTTTAAAGAAGTCCTAACCATGCGAACTGAGAACTTGAAAGTACATGAGAACAGAAGACAGTTGTTTTCTTCCACTGCTTCAAAGGATTCTGCCAACCCATTTGTACGCCAACGTCCATTAGCTTCGAGAATGGCTGCTAGTGCTTCTAATGCCCCTGCCCCACCATGGACTAGTGGGCCATCATCTTCAGCACAGTTGTTTTCTGAGAAGCAGGAGGATAGGGACCGTCAACCTTTGCTGCAGCAGCAACAGCAGTTAGTTCCATTGCAAGATAGCTACATGCAAAGTAGAGCTGAAGCTCTTCAGAATGTCGAGTCCACTATTCATGAGCTAAGCAACATCTTCAATCAATTGGCAACACTTGTTTCCCAGCAAGGAGAAATTGCTGTCAGGATTGACGAGAACATGGATGATACATTAGCAAACGTAGAGGGAGCACAGGGGGCTTTATTAAAGTATCTGAACAGCATATCTTCTAATAGGTGGTTGATGATCAAGATATTTTTTGTACTAATATTTTTCCTTATGGTTTTCCTATTTTTTGTGGCATAG 1011 0.4243 MSVKSAQSSFRDRTQEFQSIAERLKKPLTSRSRLNGPSSSSSSDELRSNVAIQSEFNRRASKIGYGIHQTSQKLDKLAKLAKRTSVFDDPTMEIQELTAIIKQDITALNSAVVDLQLLSNSRNESGNISTDTTSHSTTVVDDLKNRLMGATKEFKEVLTMRTENLKVHENRRQLFSSTASKDSANPFVRQRPLASRMAASASNAPAPPWTSGPSSSAQLFSEKQEDRDRQPLLQQQQQLVPLQDSYMQSRAEALQNVESTIHELSNIFNQLATLVSQQGEIAVRIDENMDDTLANVEGAQGALLKYLNSISSNRWLMIKIFFVLIFFLMVFLFFVA 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0586 336 PANTHER SYNTAXIN 53 328 IPR045242 -
Lele02g0586 336 MobiDBLite consensus disorder prediction 21 48 - -
Lele02g0586 336 MobiDBLite consensus disorder prediction 204 220 - -
Lele02g0586 336 SMART tSNARE_6 239 306 IPR000727 -
Lele02g0586 336 MobiDBLite consensus disorder prediction 31 48 - -
Lele02g0586 336 MobiDBLite consensus disorder prediction 194 232 - -
Lele02g0586 336 CDD SNARE_syntaxin5 247 325 - -
Lele02g0586 336 Pfam Syntaxin-5 N-terminal, Sly1p-binding domain 7 26 IPR021538 -
Lele02g0586 336 Pfam SNARE domain 284 332 IPR000727 -
Lele02g0586 336 Gene3D - 51 299 - -
Lele02g0586 336 SUPERFAMILY t-snare proteins 54 299 IPR010989 GO:0016020|GO:0016192
Lele02g0586 336 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 244 306 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0586 Lele-ChrLele02 3519509 3522243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0586 1 336 SNARE and Associated Proteins AT3G24350 62.259 7.73e-140 399
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0586 02 3519509 3522243 Lele02g0586 02 3519509 3522243 ECH
Lele02g0586 02 3519509 3522243 Lele04g0605 04 3662397 3665410 hybridization