Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0570 ATGCCGGCCGGCGACAAAGGCATCTCTCTCGACGAGATAAAAAATGAGAACGTCGATTTGGAAAAAATTCCCATAGAGGAAGTGTTTGAGCAGCTGAAATGTTCAAGACCAGGTCTATCGTCAGACGAAGGAGCCAATCGGCTCCAGGTGTTCGGACCCAACAAATTGGAAGAGAAAAAGGAAAGCAAATTTTTGAAGTTCTTGGGTTTCATGTGGAACCCTCTATCATGGGTCATGGAAGCTGCTGCAATAATGGCCATTGCTTTGGCCAATGGAGGAGGAAGACCTCCAGATTGGCAAGACTTCGTCGGTATCATTGTTCTACTGCTCGTCAACTCTACCATCAGTTTTATCGAAGAAAACAATGCTGGAAATGCTGCTGCAGCACTTATGGCTGGTTTAGCTCCCAAGACCAAGGTTCTGAGAGATGGTCGATGGAGTGAACAAGATGCTGCAATTTTAGTCCCAGGAGATATAATCAGCATCAAACTAGGAGATATTATCCCAGCTGATGCACGTCTTCTGGAGGGTGATCCTTTAAGTGTTGATCAGTCTGCCTTAACTGGAGAGTCTCTTCCTGTAACCAAAAGCTCCTCGGATGAAGTATTTTCTGGATCAACTGTTAAAAAGGGAGAGATAGAAGCAGTTGTGATTGCCACTGGTGTCCACACCTTCTTTGGTAAAGCTGCTCATTTGGTGGATAGCACCAACCAAGTTGGTCATTTCCAGAAAGTCCTCACAGCCATTGGTAACTTCTGTATTTGTTCAATTGCTGTTGGCATAGTGATTGAGATCATAGTGATGTACCCAATACAGCATCGCAAGTACAGGGATGGAATCGACAACCTTTTGGTTCTGTTGATCGGAGGAATCCCAATTGCCATGCCTACTGTCTTGTCGGTGACTATGGCTATCGGTTCTCATAGGTTGTCTCAACAAGGTGCAATCACCAAGAGAATGACTGCTATTGAGGAAATGGCAGGAATGGATGTTCTGTGCAGTGACAAGACTGGGACTCTCACGTTGAATAAGCTAAGTGTTGACAGGAACTTGATTGAGGTGTTTGCTAAGGGTGTGGAGAAGGAGTTGGTGATCCTTCTTGCAGCAAGGGCCTCCAGAACTGAGAATCAGGACGCCATAGATGCTGCAATTGTTGGGATGTTAGCTGATCCGAAGGAGGCTCGAGCTGGAATCAGGGAGGTCCATTTTCTGCCATTTAATCCCGTGGACAAGAGGACTGCTCTCACATACATTGATTCTGACGGAAGTTGGCACAGGGCTAGCAAAGGTGCTCCCGAGCAGATTTTGAACCTTTGCAACAGCAAAGAGGATGTAAGAAAGAGGGTCCATTCATGTATTGATAAGTTTGCTGAGCGTGGACTTCGTTCTTTAGGTGTTGCAAGACAGCAAGTGCCAGAAAAGTCAAAAGATGCTCCAGGTGCACCATGGCAATTTGTTGGTTTGCTACCTCTGTTTGATCCTCCTAGGCATGACAGTGCTGAGACCATCAGAAGAGCTCTTCACCTTGGTGTTAATGTTAAGATGATCACTGGTGATCAGCTTGCCATTGCGAAGGAAACTGGGAGAAGGCTTGGTATGGGAACAAACATGTACCCATCTTCTTCGTTGCTTGGAGGAGACAAGGATGCTACAGTTTCAGCTCTTCCAGTTGACGAATTGATTGAGAAGGCTGATGGATTTGCAGGAGTCTTTCCTGAGCACAAGTATGAGATAGTGAAAATATTGCAACAGAGGAAGCATATATGCGGAATGACAGGAGATGGTGTGAATGATGCACCTGCATTGAAGAGAGCAGATATTGGAATAGCCGTTGCTGATGCCACGGATGCTGCTAGAAGTGCTTCTGACATTGTCCTCACTGAACCTGGTTTGAGTGTCATTGTCAGTGCAGTGCTCACCAGCAGGGCTATTTTCCAGAGGATGAAGAACTACACTATTTATGCTGTGTCCATCACTATTCGTATCGTGTTTGGTTTCTTGTTTATTGCGTTGATCTGGAAGTTTGATTTTGCACCCTTCATGGTTCTGATTATTGCCATACTAAATGACGGAACCATTATGACAATATCCAAGGATCGAGTGAAGCCATCCCCACAGCCTGACAGTTGGAAACTGAAGGAGATATTTGCTACCGGCGTTGTGCTTGGAGGTTACTTGGCACTAATGACAGTTGTATTTTTCTGGGCTATATACGATACTGACTTCTTCTCGGACAAGTTTGGAGTGAGGTCTCTGAGAGACAGACCTGATGAAACGATGGCAGCCTTGTACCTACAAGTCAGTATTATAAGCCAGGCCCTAATTTTTGTCACTAGGTCTCGGAGCTGGTCCTATGTTGAAAGGCCTGGTCTCCTACTTCTCGGTGCTTTCTTAATTGCTCAGCTGATAGCAACTTTGATTGCTGTATATGCACATTGGGGATTCGCAAGGATTAAGGGAATGGGATGGGGATGGGCTGGTGTAATCTGGCTCTACAGTATAGTGACATATATCCCTCTTGATTTGCTCAAATTTGGTATCCGCTACGGTCTCAGTGGCAAGGCTTGGGATAATCTTTTGGAGAACAAGACTGCCTTCACTACCAAGAAAGATTATGGAAAAGAAGAGAGGGAAGCACAGTGGGCAGCTGCACAGAGAACTCTTCATGGTCTTCACCCACCAGAAACTACAAACCTTTTCAATGACAAAAATAGCTACAGGGAGCTTTCAGAGATTGCAGAGCAAGCCAAGCGACGAGCTGAGGTTGCAAGGCTAAGGGAGCTTCACACTCTAAAGGGACACGTTGAATCAGTGGTGAAGCTGAAGGGACTTGACATTGATACAATTCAGCAGCATTATACAGTGTAA 2868 0.455 MPAGDKGISLDEIKNENVDLEKIPIEEVFEQLKCSRPGLSSDEGANRLQVFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGRPPDWQDFVGIIVLLLVNSTISFIEENNAGNAAAALMAGLAPKTKVLRDGRWSEQDAAILVPGDIISIKLGDIIPADARLLEGDPLSVDQSALTGESLPVTKSSSDEVFSGSTVKKGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGIVIEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLIEVFAKGVEKELVILLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDSDGSWHRASKGAPEQILNLCNSKEDVRKRVHSCIDKFAERGLRSLGVARQQVPEKSKDAPGAPWQFVGLLPLFDPPRHDSAETIRRALHLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGGDKDATVSALPVDELIEKADGFAGVFPEHKYEIVKILQQRKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVFGFLFIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGGYLALMTVVFFWAIYDTDFFSDKFGVRSLRDRPDETMAALYLQVSIISQALIFVTRSRSWSYVERPGLLLLGAFLIAQLIATLIAVYAHWGFARIKGMGWGWAGVIWLYSIVTYIPLDLLKFGIRYGLSGKAWDNLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLHPPETTNLFNDKNSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0570 955 CDD P-type_ATPase_H 38 845 IPR006534 GO:0008553|GO:0016020|GO:0120029
Lele02g0570 955 PANTHER CALCIUM-TRANSPORTING ATPASE 21 887 - -
Lele02g0570 955 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 38 810 IPR006534 GO:0008553|GO:0016020|GO:0120029
Lele02g0570 955 SUPERFAMILY HAD-like 329 639 IPR036412 -
Lele02g0570 955 SUPERFAMILY Calcium ATPase, transduction domain A 136 233 IPR008250 -
Lele02g0570 955 ProSitePatterns E1-E2 ATPases phosphorylation site. 335 341 IPR018303 -
Lele02g0570 955 SMART Cation_ATPase_N_a_2 19 91 IPR004014 -
Lele02g0570 955 SFLD p-type atpase 315 644 IPR044492 -
Lele02g0570 955 Gene3D - 98 819 - -
Lele02g0570 955 SUPERFAMILY Calcium ATPase, transmembrane domain M 18 849 IPR023298 -
Lele02g0570 955 Pfam Cation transporter/ATPase, N-terminus 22 85 IPR004014 -
Lele02g0570 955 Pfam E1-E2 ATPase 135 312 - -
Lele02g0570 955 Pfam haloacid dehalogenase-like hydrolase 329 606 - -
Lele02g0570 955 Coils Coil 906 926 - -
Lele02g0570 955 Gene3D - 330 629 IPR023214 -
Lele02g0570 955 SFLD Haloacid Dehalogenase 315 644 - -
Lele02g0570 955 Gene3D - 904 955 - -
Lele02g0570 955 Gene3D - 136 220 - -
Lele02g0570 955 FunFam Plasma membrane ATPase 485 640 - -
Lele02g0570 955 FunFam Plasma membrane ATPase 136 220 - -
Lele02g0570 955 FunFam ATPase 4 plasma membrane-type 577 819 - -
Lele02g0570 955 PRINTS P-type cation-transporting ATPase superfamily signature 183 197 - -
Lele02g0570 955 PRINTS P-type cation-transporting ATPase superfamily signature 333 347 - -
Lele02g0570 955 PRINTS P-type cation-transporting ATPase superfamily signature 615 627 - -
Lele02g0570 955 PRINTS P-type cation-transporting ATPase superfamily signature 592 611 - -
Lele02g0570 955 PRINTS P-type cation-transporting ATPase superfamily signature 487 498 - -
Lele02g0570 955 PRINTS P-type cation-transporting ATPase superfamily signature 509 519 - -
Lele02g0570 955 Gene3D - 345 492 IPR023299 GO:0000166
Lele02g0570 955 FunFam Plasma membrane ATPase 345 492 - -
Lele02g0570 955 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 564 682 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele02g0570 955 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 105 350 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele02g0570 955 PRINTS H+-transporting ATPase (proton pump) signature 449 467 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele02g0570 955 PRINTS H+-transporting ATPase (proton pump) signature 564 580 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele02g0570 955 PRINTS H+-transporting ATPase (proton pump) signature 764 785 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele02g0570 955 PRINTS H+-transporting ATPase (proton pump) signature 592 608 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele02g0570 955 PRINTS H+-transporting ATPase (proton pump) signature 623 648 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0570 Lele-ChrLele02 3416301 3421764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0570 8 955 Primary Pumps ATPases AT2G07560 84.388 0.0 1626