Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele02g0562 | ATGGCCGTGGAGCTCATGGGGTTCCCTGAAATCGACGAGCAGAAGGCAATCCAGGAGGCTGCATCGGAAGGCCTCAAGGGTATGGAGCATCTGATCCGTCTCCTCTCTCACCAACCCAATCATTTGGACTGCACCGATGTCACCGGCGTCACCGTTTCCAAGTTCAAAAAGCTCATCTCCCTCCTCAACAGGACCGGTCACGCCCGGTTCAGGCGAGCTCCCATTCCTTCATCCTCATCTTCTTTTGCCGCGCCGCAGCCGCCGTCCTCCTCCTCGATTCCTAAAATGCATTCATTCAGTCTATCTTCGGCGCAGTTTCCCTCTCCGGCCAGCGTGTCTCCGAGTCCCGTTGTAAATCAGGCCCCGGTGCAGCACTTGCCTTCTGGTTTCGTTCCATCCCAGGCGCCGCAGAGTTTGACTCTTGATTTTACAAAGCCTAACATCGTAAGCTCTAAGACTAAACCCGTAGAGCTGGAGTTCTCGAAGGAAACCTTTAGCGTTTCTTCTAACTCGTCGTTTATGTCGTCCGCCATTACTGGAGACGGCAGCGTTTCGAACGGAAAACAAGGTTCGACTCTCTTGTTGACTCAGGCGGCTCCGACGGTTTCCGGTGGAAAACTACCTCTCACCTCGGGGCCGTTCAAGAACAGATGTCACGGCCACCGCGACCGCTCCGACGACGCATCGGGCTCCGGGAAATGTCACTGTGTGAAGAGAAGGAAAAATCGGGTGAAGAAGACGGTGAGGGTGCCGGCGATAAGTTCAAAGATAGCGGACATTCCGCCGGACGAGTACTCGTGGAGGAAGTACGGTCAGAAGCCGATCAAGGGATCACCATACCCACGAGGTTACTACAAGTGCAGCACAGTGAGAGGGTGTCCGGCGAGGAAGCACGTGGAACGAGCGACCGATGATCCGGCGATGCTGATCGTGACGTACGAGGGGGAGCACCGACATGTGATTCAGGGTGCGATGCAGGAGAACATGGCCGGGAATGTGGGTTTGGTGTTCGAGTCAACGTGA | 1023 | 0.5562 | MAVELMGFPEIDEQKAIQEAASEGLKGMEHLIRLLSHQPNHLDCTDVTGVTVSKFKKLISLLNRTGHARFRRAPIPSSSSSFAAPQPPSSSSIPKMHSFSLSSAQFPSPASVSPSPVVNQAPVQHLPSGFVPSQAPQSLTLDFTKPNIVSSKTKPVELEFSKETFSVSSNSSFMSSAITGDGSVSNGKQGSTLLLTQAAPTVSGGKLPLTSGPFKNRCHGHRDRSDDASGSGKCHCVKRRKNRVKKTVRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERATDDPAMLIVTYEGEHRHVIQGAMQENMAGNVGLVFEST | 340 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele02g0562 | 340 | ProSiteProfiles | WRKY domain profile. | 256 | 322 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lele02g0562 | 340 | MobiDBLite | consensus disorder prediction | 213 | 234 | - | - | |
Lele02g0562 | 340 | MobiDBLite | consensus disorder prediction | 216 | 234 | - | - | |
Lele02g0562 | 340 | FunFam | WRKY transcription factor 65 | 245 | 322 | - | - | |
Lele02g0562 | 340 | Pfam | Plant zinc cluster domain | 215 | 259 | IPR018872 | - | |
Lele02g0562 | 340 | MobiDBLite | consensus disorder prediction | 72 | 96 | - | - | |
Lele02g0562 | 340 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 15 | 321 | IPR044810 | GO:0003700 | |
Lele02g0562 | 340 | SUPERFAMILY | WRKY DNA-binding domain | 259 | 319 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Lele02g0562 | 340 | MobiDBLite | consensus disorder prediction | 74 | 96 | - | - | |
Lele02g0562 | 340 | Pfam | WRKY DNA -binding domain | 263 | 319 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lele02g0562 | 340 | Gene3D | WRKY domain | 244 | 321 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Lele02g0562 | 340 | SMART | WRKY_cls | 261 | 321 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele02g0562 | Lele-ChrLele02 | 3382519 | 3384119 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele02g0562 | 1 | 339 | WRKY Transcription Factor Family | AT2G24570 | 57.386 | 1.07e-112 | 328 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Lele02g0562 | WRKY | 9.1e-26 | CL0274 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele02g0562 | 02 | 3382519 | 3384119 | Lele02g0562 | 02 | 3382519 | 3384119 | ECH | |
Lele02g0562 | 02 | 3382519 | 3384119 | Lele03g0574 | 03 | 3392358 | 3393962 | hybridization | |
Lele02g0562 | 02 | 3382519 | 3384119 | Lele04g0581 | 04 | 3520131 | 3521723 | hybridization |