LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele02g0557	ATGCTTCTGGCAGTGGCAGGGGAAGATGCTTCTATAAGCAAGATGAATGCCCTCCATTGTCACTTTGAGGGAGCACTTGAAAATGGTTTTCTCACGAACTATCATGCTGCTGTGATGTTATTGTTTTACGATGATGGTAAACAGAAACTGGAGCTTTCTTTGGAAAAGCCATTGTCAGTATACATGGTACACACAGCCGTAAACTCTGAAGGCAAGATTGTGAGTGGTGATAAGAACAAAATTAACCTAAAAATTCCTTCTCTCGGAAAGATTAAGGTATTCCCAGAAAATCATGAACCATGGAAGAAGAGAATCCTTGATCCTGGAAGTGACATATATTTGCAGTGGAACAGGGTTTTCCTCTGTTCTTTGACATGTTTCCGAACATTGGCTGATATTTTCTATATGCTGAACCTGCTCATAAAGTTCAGAACAGCTTACGTATCACCAAGATCCAGGGTTTTTGGAAGGGACGAGTTAGTCATGGATCCAAGTTTGATTGCAACACGTTATCTAAGGTCAAAATTCTTCATAGATCTTGTGGCTACACTACCTCTTCCTCAGATCATGATTTGGTTTATTATGCCTGCAAGTAGAAGCTCCCATGCTGATCACACCAACAATACTCTTGTTCTGATTGTTCTGCTTCAATTTATTCCCAGATTATATTTGATTTTCCCCTTAAGTTCTCAGATTATCAAAGCCACTGGTGTAGTCACCAAGACAGCTTGGGCTGGAGCAGCTTATAACCTTTTACTTTACATGTTGGCTAGCCATGTGTTGGGGGCATCATGGTACTTGTTGTCAATTGAAAGGAATGCTACATGTTGGAAATCACAATGCAAGAATGAAACTTTCCCCATGAAATGTGTTCTTCAATACTTGGATTGCAACAGTTTAAATGATGATGATCGCATGAAGTGGATAAACACTACTTCTGTGTTTGATAACTGCAATCCAAATAATGACATGAGTTTCAAGTATGGCATTTTTGGACCTGCAGTTGAAAACAACGTTGTTTCCTCACAGTTTGTAGAGAAGTATCTCTATTGTCTATGGTGGGGCTTGCAAAACTTGAGGTCTGATTCTAGTTATTCTGAGTACAAGCACATTCATTGGGGAAACTGCATTTGCCATACTTATAGCTATCCTGGGTCTTGTTTTGTTTGCCCGCTTAATTGGAAACATGCAGAACGTGTTCGAAGATTTGTTGAATACAAGTGGCTTGCAACTCGAGGAGTTGATGAAGAAACCATCTTGCGAGGCCTTCCCATAGACCTGCGTAGAAATATCCAACGGCACCTTTGGTTAGACCTTGTTCGACGTAGATGCTTTTCATTACAAATGGAGGAAGAACAGGTTTCTTCAACTTCCAATTTACCTTCTTCTACAAGAACAGTGAAAGCCCTTGTGGAAGTTGAAGCCTTTGCACTAAGAGCTGAGGATCTTAAGTTTGTTGCTAATCAGTTTCGCCGTCTTCACAGCAAAAAGCTGCAACATACCTTCCGTTTCTACTCTTACCATTGGAGGACATGGGCAGCATGCTTCATTCTAGCTGCTTGGAGAAGGTACACGAAGAGGAAGCTCGCGGCGAGCCTTAGTTTGAAGGAATGTCACTCATTTGCTTATGAGGAGGAGAAGCCTAGTGCTGTTGTGGCTTCAACTTCGAGTGCAAATTCATTGGGTGTGACTATACTTGCCTCAAGATTTGCTGCAAACACAAGAAGAGGAGCTCAGAAGATTAAGAATCTTAAGATGCCTAAGTTGCCGAAGCCTCAAGATCCTGACTTCTCAGTGGAAGCAGAGGATGATTAG	1815	0.4143	MLLAVAGEDASISKMNALHCHFEGALENGFLTNYHAAVMLLFYDDGKQKLELSLEKPLSVYMVHTAVNSEGKIVSGDKNKINLKIPSLGKIKVFPENHEPWKKRILDPGSDIYLQWNRVFLCSLTCFRTLADIFYMLNLLIKFRTAYVSPRSRVFGRDELVMDPSLIATRYLRSKFFIDLVATLPLPQIMIWFIMPASRSSHADHTNNTLVLIVLLQFIPRLYLIFPLSSQIIKATGVVTKTAWAGAAYNLLLYMLASHVLGASWYLLSIERNATCWKSQCKNETFPMKCVLQYLDCNSLNDDDRMKWINTTSVFDNCNPNNDMSFKYGIFGPAVENNVVSSQFVEKYLYCLWWGLQNLRSDSSYSEYKHIHWGNCICHTYSYPGSCFVCPLNWKHAERVRRFVEYKWLATRGVDEETILRGLPIDLRRNIQRHLWLDLVRRRCFSLQMEEEQVSSTSNLPSSTRTVKALVEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSYHWRTWAACFILAAWRRYTKRKLAASLSLKECHSFAYEEEKPSAVVASTSSANSLGVTILASRFAANTRRGAQKIKNLKMPKLPKPQDPDFSVEAEDD	604

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele02g0557	604	Pfam	Ion transport protein	124	360	IPR005821	GO:0005216\|GO:0006811\|GO:0016020\|GO:0055085
	Lele02g0557	604	Gene3D	Helix hairpin bin	394	436	-	-
	Lele02g0557	604	MobiDBLite	consensus disorder prediction	581	604	-	-
	Lele02g0557	604	SUPERFAMILY	Voltage-gated potassium channels	116	358	-	-
	Lele02g0557	604	Gene3D	Jelly Rolls	440	492	IPR014710	-
	Lele02g0557	604	PANTHER	CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED	393	451	-	-
	Lele02g0557	604	SUPERFAMILY	cAMP-binding domain-like	392	494	IPR018490	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele02g0557	Lele-ChrLele02	3347883	3353266	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele02g0557	456	600	Ion Channels	AT2G24610	59.756	2.29e-52	189