Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0549 ATGGATCCAAAGAAATCTAACAAGATCAGAGATATTGTTAGGCTTCAACAGATCCTCAAGAAATGGAGAAAGCAAGCCAGCTCTTCAAAAACCAGTGGCTGTAACAGCAGTGGTGGCAGTAAAAGCATCAAGTTTCTGAAGAGGACACTTTCTATATCCGAACGAGAAGGGGGATCAAGCAATGTTGTTCCAAAAGGCTATCTCGCTGTTTGCGTTGGGGAAGAGCTGAAGAGGTTCATTATACCTACTGAATATCTGAGCCATCATGCATTTCATGTGTTACTAAGAGAAGCAGAAGAAAAATTCGGGTTTCAACAGACTGGTGTTCTGAGAATCCCTTGTGAAGTGCCAGTTTTTGAGAGTATCTTGAAGATGGTGCAGGGAAAGAAGGACCAATCTAGCACTCAAGAATGCAGACTTAAAGTTGAAGAAATATTGGGACACTGCTCATTAGAACACCAGCTTGCTTACTCTCACCATCCCCAGAGTCCAATGTGCAGATAA 504 0.4246 MDPKKSNKIRDIVRLQQILKKWRKQASSSKTSGCNSSGGSKSIKFLKRTLSISEREGGSSNVVPKGYLAVCVGEELKRFIIPTEYLSHHAFHVLLREAEEKFGFQQTGVLRIPCEVPVFESILKMVQGKKDQSSTQECRLKVEEILGHCSLEHQLAYSHHPQSPMCR 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0549 167 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 31 122 IPR003676 GO:0009733
Lele02g0549 167 Pfam Auxin responsive protein 15 126 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0549 Lele-ChrLele02 3305272 3305775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0549 1 167 Calmodulin-binding Proteins AT2G24400 54.211 3.68e-59 180
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0549 02 3305272 3305775 Lele02g0549 02 3305272 3305775 ECH
Lele02g0549 02 3305272 3305775 Lele03g0559 03 3318867 3320028 hybridization
Lele02g0549 02 3305272 3305775 Lele04g0567 04 3441613 3442125 hybridization