Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0546 ATGATGGAGACGAAGCCGGCCGCCGTCTTGCCAGCCTGCACCGCCACTCAAACCCAATCTCCGCAAGCGTCGTCGGTTCTCTCTGGCGTCTGCAACATGAAACGGACGCCGTCCGAGTTGGCCCTGGAAGAGTTCCTGAATAAGACGGTCGCATCGACCAACGACGAGGACGTGAAACCGTACGAGCTTTGGGGTCAAAGAGACAAAAGTTTCCCCCACGCGGACGCATTTCTCGCCGGCGTCGGCTCCGACGATTTCGATCACGCTTTCCGAAACTCGGATGCGGTGACTGCGTTTTCAACTTGTGAGGAACTAACAGTTTCCCTTTTATGGCCCCAGAAGCATTCACCTCTCTCTGCTACGATTGAATCTCAGTCATCCATTTGTGGTACTGCTGTTTGCAGCCCTGTGTCAGCTAATAATCAACCAACCCTCGGAGATAATAATCAAGCCAAAGGAACCACCACAAGTGCTTCTTCGTCCCGTGAGCAATCTGATGAGGATGACGTAGCGGGCCCTTGTGATCAGAGCACAAACCCCATTGATATGAAGCGCCTCAGAAGGAAGGTTTCTAATAGGGAATCTGCAAGGAGATCCAGAAGAAGAAAACAAGCACATCTGACTGATCTTGAGTTGCAGGTTGAGCAACTGAGATTGGAGAATGCAGCTCTCTACAAGCAGCTTACAGATGCCGGTCAGCAATTTCGCGAGGCTAATACAAATAACCGAGTGCTAAAATCGGATGTCGAAGCTTTGAGAGCCAAGGTGAAGTTAGCTGAAGATATGGTGACTAGGGGCTCGTTCTCAACCTTAAATAATCCGCTTGTTCAGAATCAGAGTCATCAGCTAAACGCGCCACCGCAACTCAACACCACTAGCCTGCAGCGTTGCATGGCCCATGTCTCGCCGACGATCACTGTCCATGGAATTGATGCTTCATATGCTGCTGTTGCAGTTGATGATCACAATTCATCTCTTGGTCTTGCAAACTTAGATATCAGCAACAGCAATTTCAATAGTGGAGTTATTAGTGATGCTATGAGGTGTATCAATGAAATATATCGTTGA 1068 0.4916 MMETKPAAVLPACTATQTQSPQASSVLSGVCNMKRTPSELALEEFLNKTVASTNDEDVKPYELWGQRDKSFPHADAFLAGVGSDDFDHAFRNSDAVTAFSTCEELTVSLLWPQKHSPLSATIESQSSICGTAVCSPVSANNQPTLGDNNQAKGTTTSASSSREQSDEDDVAGPCDQSTNPIDMKRLRRKVSNRESARRSRRRKQAHLTDLELQVEQLRLENAALYKQLTDAGQQFREANTNNRVLKSDVEALRAKVKLAEDMVTRGSFSTLNNPLVQNQSHQLNAPPQLNTTSLQRCMAHVSPTITVHGIDASYAAVAVDDHNSSLGLANLDISNSNFNSGVISDAMRCINEIYR 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0546 355 Gene3D - 183 239 - -
Lele02g0546 355 SUPERFAMILY Leucine zipper domain 184 232 IPR046347 GO:0003700|GO:0006355
Lele02g0546 355 SMART brlzneu 180 244 IPR004827 GO:0003700|GO:0006355
Lele02g0546 355 FunFam BZIP transcription factor 182 233 - -
Lele02g0546 355 Pfam bZIP transcription factor 183 229 IPR004827 GO:0003700|GO:0006355
Lele02g0546 355 Coils Coil 200 262 - -
Lele02g0546 355 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 187 202 IPR004827 GO:0003700|GO:0006355
Lele02g0546 355 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 182 245 IPR004827 GO:0003700|GO:0006355
Lele02g0546 355 MobiDBLite consensus disorder prediction 140 182 - -
Lele02g0546 355 MobiDBLite consensus disorder prediction 140 161 - -
Lele02g0546 355 PANTHER BASIC LEUCINE ZIPPER 63 18 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0546 Lele-ChrLele02 3289147 3292267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0546 33 354 bZIP Transcription Factor Family AT5G24800 40.308 3.01e-56 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele02g0546 bZIP_1 1.5e-10 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0546 02 3289147 3292267 Lele02g0546 02 3289147 3292267 ECH
Lele02g0546 02 3289147 3292267 Lele03g0556 03 3297399 3300535 hybridization
Lele02g0546 02 3289147 3292267 Lele04g0564 04 3424464 3427561 hybridization