Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0541 ATGGAGATTATTAGATTCCATGCTTTTCGCTTCCGCAATTTGCCTGTCTTTTATAACAAGCAAATTATGACCATTATTTCATCAATTTCATGCGATATATGCGCTCTTAAGGAGAAGGAAGCAAGCAGCAAAGAGATAGAAATGGAAAGGTGTAATGGAGGAAAAGATGAAACCCTACCACCGGGATTTCGATTCCATCCTTCAGATGAAGAACTCATCACTCACTATCTCATCAACAAGATCTCTGATTCTAGCTTCACGGGAAGAGCAATCGCTGATGTAGATCTCAACAAATGCGAGCCTTGGGAGCTCCCGGGTACGTTACTTCAAGATGAATGGGTGGTATGCCGAGTGTTCCAGAAGAGTGCGAGTGTGGTAAAGAAGTACCCTAATTCGAACCATACAAGAGGATTCAATCCTTATGGCCTGGACTTAGCAGCTGTTAATATGCCACCGCCGATGAATATGATGCAGCTTGGAGATCCTGCAACTCATTTCCTTTACGGAAGGAATCATAATAATAATAATAATAATTACCTGATGACGAATCATTCTGTGGCAAGCAATAATAATACTTCTCTGAACCTTCCGATGCAATCCCACCACTGGAACTATCCCGTTACAGCATCAGGAGGGTTCAGTATCTCAGCCCTAAATTTGAATCTGGGGAATACAGTTGCAGGTGGAGGAGGATCACTCACCTCATCACAACCCTTTTTGCGACCATTCAGTAACCAACACGATTTGGCAAGTTCTAACAACATAGTGATGACACCTGTCACTTCTCTCGGAGCAGACAACATAGGAGGCTGCTATGGTGTGGATATGAGCAACGTCAATCCTCAGACGACGACTCAAAGTAATAGGTATGTGGGCATGGCGGATCACTGTGTTGATCTCGATGCTTACTGGCCTTCCTACTAA 924 0.4361 MEIIRFHAFRFRNLPVFYNKQIMTIISSISCDICALKEKEASSKEIEMERCNGGKDETLPPGFRFHPSDEELITHYLINKISDSSFTGRAIADVDLNKCEPWELPGTLLQDEWVVCRVFQKSASVVKKYPNSNHTRGFNPYGLDLAAVNMPPPMNMMQLGDPATHFLYGRNHNNNNNNYLMTNHSVASNNNTSLNLPMQSHHWNYPVTASGGFSISALNLNLGNTVAGGGGSLTSSQPFLRPFSNQHDLASSNNIVMTPVTSLGADNIGGCYGVDMSNVNPQTTTQSNRYVGMADHCVDLDAYWPSY 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0541 307 Pfam No apical meristem (NAM) protein 60 115 IPR003441 GO:0003677|GO:0006355
Lele02g0541 307 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Lele02g0541 307 Gene3D NAC domain 68 110 IPR036093 GO:0003677|GO:0006355
Lele02g0541 307 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 56 106 - -
Lele02g0541 307 SUPERFAMILY NAC domain 57 122 IPR036093 GO:0003677|GO:0006355
Lele02g0541 307 ProSiteProfiles NAC domain profile. 59 221 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0541 Lele-ChrLele02 3261358 3263649 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0541 56 113 NAC Transcription Factor Family AT3G18400 66.667 1.60e-23 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele02g0541 NAM 3.1e-13 No_clan