Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0515 ATGTTCCGGCAATTCACTCCGAAACGTTACCTACCATTATTGATGGACCAGAGTGAAACCAATTCTGATTTAGCACCACGGAAACTTTCTCGGCAATTGGATTTCACGGCCATCGGTGGAGATTCAGTGAACGCAGAGTTGCCGAGGGCACCTCAATCTCAGACGCACTTAGAACTACCACCTCAGACGCAGAAACCGTTACGACAGTCGATTTTGCGGTCAGAATCACTATCACCGTCTCAAATACAAATTGAACCGAAGTTGCAGTCGCAGGCTTACACACCGACACAAGCAAAGTTACCTTTACGATCGCAGGGGCAGCTGCCATGGTCATCTCCACTCACACAACAACAGCGAGCACCGCAATCTCAGGTCAAGCAGCAATCGCAACAGCGGCCGCAGCTAGTTTCACCTGTTTGTCGAATTCCGCACCCTGTGCAGAAAATTTCGATGACGACGTTACAATTACTGAAGCAAGAGCCTCCTAGTAAAAGACCTTGGCATAATGTGGAATCAAAAGACAGCCCTCCAAAGAAACAAAAGCAGTGCAACTGCAAGAATTCTCGATGCCTTAAATTGTACTGTGAGTGTTTTGCAGCTGGGATCCATTGTGATGGCTGCAACTGTTTAAATTGTCATAATAATGTGGATAATGAGGCTGCCAGACAGGAGGCGGTTGGAATAATTTTGGAGCGCAATCCAAATGCTTTCAGACCAAAAATTGCTAGCAGTCCACAAGAATCACGGGGTTCCAAGGAAGAGGCTGAAATTCAAGTGTTGGGGAAGCATAATAAAGGATGTCACTGCAAGAAATCAGGCTGCCTTAAGAAGTATTGTGAGTGTTTCCAAGCCAATGTCCTCTGCTCTAAAAATTGTAAATGCATGGACTGCAAAAATTTTGAAGGAAGTGAAGAAAGAAGCGCTCTTGATCCAATTAACCTCAAACAGGCAGCTAATGCTGCCATCAGTCAAGCAATTGGGGTCTCTGGCTATGGAATGCTCACTACACCCAAGAGAAGAAAACTTAAGGAAATATTATCTGGCAAAGCTGCCATAGATCAAGCTGTTTTCACTTCTCAATTTCAACAGGAAAATGATCCAGCGGTTGTGACACCTGCTCCGTCTGCGTCTGTTGCCACTTATATTGCCAGGGAAACAATTCCAGGGTCTTCAAGATCAGCATACAGGTCCCCATTGGCGGATGCCCTCCAGCCACAGGACGTGAAGTATCTCTGTTCACATTTTGTTGTTCTATCAGTAGTAGCCGCGAAGACATATGCAGAGTCAATAGGCATGGTAGACCAGCAAATGGAGATCAAGAAATTTGAAACTTCTGTTGCTTCATCAGCTGAATTACTGCAAGACAATAAAGAAGTCCACAAGCCCATCTTTTATGATCATGGAAAGAAAAATGGAGCAGAGAGAAGTGGAACTAGTGATTCTGGATCAGATGGAGTTGATATGCAGAACTACGGGAGGCCATTGTCACCAGGAACGCTAGCATTGATGTGTGATGAACAAGATGACATGTTTCTTTCCAATAGTTCTGCTAACGCTGTGTCTTGCAATGATCAAACAATGATTCATAAGCCATCATATTCTGATGTTTACATGGACATTTATGGAGAGCAAGAGCGGCTCGTGCTGACCAGGTTTTGGGATGTTCTCCGTGGACTCATCACTCGTGGAAGCATAAAAGCTTCTGCAGAAGCGATGTGCTCCCCATTAGCCAAGAAAGAGGTGGGAAGCAAACAAGAAGCAGCTGATAATGGCAATAATGGAGCTGAAACTGATTTAATAAGTGAGAAGGGGAAGGAAGCTCACATGCACAGCAATGGCAGTGCAAATTCCCACGTCCCATTAGCCACAAAAGTATCTGAGACAAGTAGTGCCATACCTAATGGACAAGATAATGATGATCTGTCATTGAGGATCGGTCTGCCTACTGGAATTGCTGGGTTGATATAA 1968 0.4482 MFRQFTPKRYLPLLMDQSETNSDLAPRKLSRQLDFTAIGGDSVNAELPRAPQSQTHLELPPQTQKPLRQSILRSESLSPSQIQIEPKLQSQAYTPTQAKLPLRSQGQLPWSSPLTQQQRAPQSQVKQQSQQRPQLVSPVCRIPHPVQKISMTTLQLLKQEPPSKRPWHNVESKDSPPKKQKQCNCKNSRCLKLYCECFAAGIHCDGCNCLNCHNNVDNEAARQEAVGIILERNPNAFRPKIASSPQESRGSKEEAEIQVLGKHNKGCHCKKSGCLKKYCECFQANVLCSKNCKCMDCKNFEGSEERSALDPINLKQAANAAISQAIGVSGYGMLTTPKRRKLKEILSGKAAIDQAVFTSQFQQENDPAVVTPAPSASVATYIARETIPGSSRSAYRSPLADALQPQDVKYLCSHFVVLSVVAAKTYAESIGMVDQQMEIKKFETSVASSAELLQDNKEVHKPIFYDHGKKNGAERSGTSDSGSDGVDMQNYGRPLSPGTLALMCDEQDDMFLSNSSANAVSCNDQTMIHKPSYSDVYMDIYGEQERLVLTRFWDVLRGLITRGSIKASAEAMCSPLAKKEVGSKQEAADNGNNGAETDLISEKGKEAHMHSNGSANSHVPLATKVSETSSAIPNGQDNDDLSLRIGLPTGIAGLI 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0515 655 MobiDBLite consensus disorder prediction 104 136 - -
Lele02g0515 655 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 180 215 IPR005172 -
Lele02g0515 655 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 265 299 IPR005172 -
Lele02g0515 655 ProSiteProfiles CRC domain profile. 179 302 IPR005172 -
Lele02g0515 655 MobiDBLite consensus disorder prediction 104 137 - -
Lele02g0515 655 MobiDBLite consensus disorder prediction 164 180 - -
Lele02g0515 655 MobiDBLite consensus disorder prediction 466 489 - -
Lele02g0515 655 MobiDBLite consensus disorder prediction 47 67 - -
Lele02g0515 655 SMART CXC_2 178 218 IPR033467 -
Lele02g0515 655 SMART CXC_2 262 303 IPR033467 -
Lele02g0515 655 MobiDBLite consensus disorder prediction 43 67 - -
Lele02g0515 655 MobiDBLite consensus disorder prediction 159 182 - -
Lele02g0515 655 PANTHER TESMIN/TSO1-RELATED 50 565 IPR028307 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0515 Lele-ChrLele02 3118534 3125393 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0515 125 581 CPP Transcription Factor Family AT4G29000 47.292 3.21e-125 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Lele02g0515 TCR 4.2e-12 No_clan