Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0509 ATGAGCGAGTGGTTGGTGGTGTTCATCATGATTCTTTCATTGTCGTTGAATGTTCAGTCCCAAGGAACACCAGAGAGCACGCAGGAAGATATACCTGAGGCCATCCTTCCCAGTAAAGGAATTATAATAGGAATCCTTACCGTTATGTTCGCCATATCATTGTTCCTTGTGGCTTATGTTAAGTTCTGTAAAAGTCGATCCACTGAGCCTCTGAACCTTGATATGAACAATCCTGGAATAAGCCGATCATGGTCAAGATATTCCGGGATAGACAAACAAGTAATCGAAGCACTGCCATTTTTCAAGTTCTCTTTACTCCAGGGGTCAAAAGAAGGCCTAGAATGTGCGGTTTGCCTCTCAAAATTCAACGACGCTGAGGTTCTTAGGTTGCTGCCCAAGTGTACAAGGTTGACCCTGCCGACATCAAGACATTCAATTCCTCCATCAGTTCCAGGTTCCTTCGAATTCCTTCCGACATAA 480 0.4417 MSEWLVVFIMILSLSLNVQSQGTPESTQEDIPEAILPSKGIIIGILTVMFAISLFLVAYVKFCKSRSTEPLNLDMNNPGISRSWSRYSGIDKQVIEALPFFKFSLLQGSKEGLECAVCLSKFNDAEVLRLLPKCTRLTLPTSRHSIPPSVPGSFEFLPT 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0509 159 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 89 143 IPR013083 -
Lele02g0509 159 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 20 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0509 Lele-ChrLele02 3075560 3076109 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0509 37 134 C3H Transcription Factor Family AT2G20030 45.714 1.12e-25 99.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0509 02 3075560 3076109 Lele03g0532 03 3138631 3139629 hybridization
Lele02g0509 02 3075560 3076109 Lele04g0531 04 3208779 3209777 hybridization