Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0499 ATGGATTCTGTATCCCCCAATCCTCGCTTCTCCGATCGGATCCTCCGCGCTCTCCGCCACCCTCTTCTCCTCCTCCACCGCTCCCATTCCTCCTTCTTCATATTAGGCGCCACCGCTAATGTCTACACCGTCACTCTCTCCTCCCTCCCCTCCTGCACCTGCCCCGACCGCACTACCCCTTGCAAGCACATTCTTTTCGTCCTCATTCGAGTTCTCGGCCTCCCCCTCGACCACTTCTGCCTTCGCCGACGAACCATCCGCCCCTCCCAACTCCGCCGCCTCCTCGACCTCCCCACCTCGCCGGACGCCCTCGCCAGGGCCGCCCTTCGCGAGCGGTTTCACCAGCTTTTCTTCACCGAAAGGCAGGAACCCAGTATAGAGGTGGAGGATGGGACCACGTGTCCGATTTGTCTAGAGGAAATGGGGAAGGATGACAGAGTCGCCGCGTGTAAGACGTGTCGGAATCCAATTCATGAAGAATGTTTGGTGAAGTGGAAGCGAAGCAGAGGAAGGAGAATCGCTAGTTGTGTGATTTGTAGGGCAAGATGGAGGGGCGTGAATGATCAAGATCAGTATCTAAATCTCTCTGCTTACATTGGTCATGACGATACGGGCGAGGCCAGTGGAGGTCTTTGCTCCGGTTAA 645 0.569 MDSVSPNPRFSDRILRALRHPLLLLHRSHSSFFILGATANVYTVTLSSLPSCTCPDRTTPCKHILFVLIRVLGLPLDHFCLRRRTIRPSQLRRLLDLPTSPDALARAALRERFHQLFFTERQEPSIEVEDGTTCPICLEEMGKDDRVAACKTCRNPIHEECLVKWKRSRGRRIASCVICRARWRGVNDQDQYLNLSAYIGHDDTGEASGGLCSG 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0499 214 Pfam Ring finger domain 133 180 IPR001841 -
Lele02g0499 214 ProSiteProfiles Zinc finger RING-type profile. 134 180 IPR001841 -
Lele02g0499 214 ProSiteProfiles Zinc finger RING-CH-type profile. 126 186 IPR011016 GO:0008270
Lele02g0499 214 PANTHER RING FINGER AND SWIM DOMAIN-CONTAINING PROTEIN 2 7 185 IPR039903 GO:0061630
Lele02g0499 214 ProSiteProfiles Zinc finger SWIM-type profile. 42 72 IPR007527 GO:0008270
Lele02g0499 214 Pfam SWIM zinc finger 42 70 IPR007527 GO:0008270
Lele02g0499 214 SUPERFAMILY RING/U-box 125 184 - -
Lele02g0499 214 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 120 197 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0499 Lele-ChrLele02 3012364 3013008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0499 92 180 Glycosyltransferase AT5G37200 31.111 7.71e-06 43.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0499 02 3012364 3013008 Lele02g0499 02 3012364 3013008 ECH
Lele02g0499 02 3012364 3013008 Lele04g0519 04 3139715 3140359 hybridization