Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0497 ATGAAGGGCCACAGGATGATGGCTGTGAGTTCTGGGTGTAAAGAGGGAAGCAAGGTGGGAATGGAGAACGGCAAGTATGTGAGGTACACGCCGGATCAGGTTGAAGCTCTGGAGAGACTTTATCACGAATGCCCTAAGCCCGGTTCCATGCGTCGCCAGCAGCTCATCAGAGAATGCCCCATTCTCTCTAATATCGAGCCCAAGCAGATCAAAGTTTGGTTCCAGAACCGAAGATGTAGAGAGAAGCAGCGGAAGGAATCGACACGGCTGCAAGCTGTGAACAGGAAACTGACGGCCATGAATAAACTACTGATGGAGGAAAATGAGAGATTGCAGAAGCAAGTGTCACGGCTGGTTTATGAGAACAGCTTTTTCCGCCAACAGACACAGAATGCGAGCCTCACTACGACGGACACAAGCTGTGAGTCAGTGGTAACCAGAGGTCAGCACCATGTGACACCTCAGCATCCACCAAAGGATGCCAGCCCTGCTGGACTTTTGTCCATTGCAGAGGAGACCTTAGCAGAGTTTCTTTCGAAGGCCACTGGAACTGCCGTGGAGTGGGTCCAAATGCCTGGGATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCTATTTCTCATGATTGCCCTGGAGTAGCAGCACGAGCCTGCGGCCTTGTGGGTCTGGAACCTACAAGGGTTGCGGAAATACTCAAAGATAGGCCCTCGTGGTTTCGTGATTGCCGAGCCTTGGATGTTCTGAATGTGATGCCCACTGGAAATGGGGGAACCATTGAAATGCTTTACTTGCAGTTGTATTCGCCAACAACTTTGGCCCCTGCTCGTGACTTCTGGTTGCTGCGCTACACATCAGTTTTGGAGGACGGCAGTTTGGTGGTCTGTGAAAGATCACTTAACAACACCCAGAATGGACCTACAGTGCCCCCAGTGCAGCACTTTGTTAGGGCAGACATGCTGCCGAGCGGGTATCTGATTAGACCTTGTGAAGGAGGTGGATCCATTATTCATATTGTTGATCATATGAATTTAGAGCCCTGGAGTGTTCCTGAAGTGTTACGCCCACTTTATGAGTCATCAACGCTGCATGCTCAAAAGACAACGATGGCGGCCTTACGTCATTTGAGGCAGATCTCTCAAGAAGCTTCTCAACCAACAGTCTCCGGATGGGAGAGAAGGCCTGCAGCTCTACGTGCACTTAGTCAGCGATTGAGCAAGGGATTCAATGAAGCTGTCAATGGGTTTGCAGATGATGGATGGTCCATGTTAGAAAGTGATGGCATTGATGATGTCGCCCTTCTGGTGAATTCATCTCCCAACAAGATGGAGGGAGTAAATTTTGTTCAGAGCAATGGATTTCATTATATGAGCAGTTCTGTGCTATGTGCCAAAGCATCAATGCTGTTACAGAATGTCCCTCCACCAATTCTTCTCAGATTCTTGCGGGAGCACCGATCAGAGTGGGCAGATAGCAGTATTGATGCTTACTCAGCTTCTGCCATCAAAGCTGGTCCCTGTAGTTTTGGGGGTCAGGTTATTCTGCCTCTGGCTCACAATATTGAACATGAAGAGGTCATGGAGGTCATTAAGCTTGAAAACATGGGTTACTATAGGGATGACATGACGATACCTGAGGATGTTTTCCTCTTGCAACTTTGTAATGGAGCAGATCAGCACGCAGATGGTACCTATGCAGAACTCATTTTTGCTCCTATTGATGCATCTTTCTCTGATGATGCACCTATCTTACCTTCTGGTTTTCGCATCATAGCTCTCAATTCTAACACGGATGCTGCAAGTTCAAATCGTACACTTGATCTTGCTTCTTCTCTTGAAGTTAAAACCACAGCTAACAAAGCAGGCAATGACAATAATGGTAACACAAAATCGGTGATGACAATGGCATTCCAGTTTGCATTTGAAGTCCACCTTCAGGATAGTGTAGCCGCAATGGCCCGGCAGTATGTCCGCAGTATTATTGCATCTGTTCAAAGGGTTGCATTAGCACTCTCCCCTTTACATTTTGGTTCTCATAATGGCTTGCATGCTCCACCTGGCCCTCCTGAGGCACAAACACTTGCTCGTTGGATCTGTCAAAGCCATAGATGCTATCTAGGGGTAGAACTGCTAAAATGTGAAGGCAGTGAATCCACTCTCAAATCCCTTTGGCATCACTCAGATGCTATCCTGTGCTGCTCTTTAAAGGCATTAACCACATTCACATTCGCTAATCAAGCTGGACTTGACATGCTTGAGACAACTTTGGTGGCTCTTCAAGACATCACTCTGGAAAAAATCTTTGACGAGAGTGGGAAGAAAACCCTTTTCTCCGAGTTCCCTCATATAATGCAGCAAATTCTAAAGAGGCATTGCTATGATGATTGCAGGGTTTTATGTGCATGCAAGGTGGAATCTGCATATCCAGCATGGGGAGGCCAGTGTCGTATGAGAGGACAGTGGTATGGAAAGTGTCGAACGAAGAAGAAATGGCGCAATGCATATGTTTCATGTTCATGA 2517 0.4736 MKGHRMMAVSSGCKEGSKVGMENGKYVRYTPDQVEALERLYHECPKPGSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKESTRLQAVNRKLTAMNKLLMEENERLQKQVSRLVYENSFFRQQTQNASLTTTDTSCESVVTRGQHHVTPQHPPKDASPAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHDCPGVAARACGLVGLEPTRVAEILKDRPSWFRDCRALDVLNVMPTGNGGTIEMLYLQLYSPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPTVPPVQHFVRADMLPSGYLIRPCEGGGSIIHIVDHMNLEPWSVPEVLRPLYESSTLHAQKTTMAALRHLRQISQEASQPTVSGWERRPAALRALSQRLSKGFNEAVNGFADDGWSMLESDGIDDVALLVNSSPNKMEGVNFVQSNGFHYMSSSVLCAKASMLLQNVPPPILLRFLREHRSEWADSSIDAYSASAIKAGPCSFGGQVILPLAHNIEHEEVMEVIKLENMGYYRDDMTIPEDVFLLQLCNGADQHADGTYAELIFAPIDASFSDDAPILPSGFRIIALNSNTDAASSNRTLDLASSLEVKTTANKAGNDNNGNTKSVMTMAFQFAFEVHLQDSVAAMARQYVRSIIASVQRVALALSPLHFGSHNGLHAPPGPPEAQTLARWICQSHRCYLGVELLKCEGSESTLKSLWHHSDAILCCSLKALTTFTFANQAGLDMLETTLVALQDITLEKIFDESGKKTLFSEFPHIMQQILKRHCYDDCRVLCACKVESAYPAWGGQCRMRGQWYGKCRTKKKWRNAYVSCS 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0497 838 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 21 785 IPR044830 GO:0003700
Lele02g0497 838 SMART START_1 168 378 IPR002913 GO:0008289
Lele02g0497 838 CDD homeodomain 25 85 IPR001356 GO:0003677
Lele02g0497 838 Pfam MEKHLA domain 692 785 IPR013978 -
Lele02g0497 838 Gene3D - 199 384 IPR023393 -
Lele02g0497 838 ProSiteProfiles 'Homeobox' domain profile. 20 84 IPR001356 GO:0003677
Lele02g0497 838 ProSiteProfiles START domain profile. 159 373 IPR002913 GO:0008289
Lele02g0497 838 SMART HOX_1 22 88 IPR001356 GO:0003677
Lele02g0497 838 CDD bZIP 77 116 - -
Lele02g0497 838 SUPERFAMILY Bet v1-like 168 380 - -
Lele02g0497 838 Pfam Homeodomain 25 83 IPR001356 GO:0003677
Lele02g0497 838 Coils Coil 90 121 - -
Lele02g0497 838 FunFam Homeobox-leucine zipper protein REVOLUTA 25 80 - -
Lele02g0497 838 Pfam START domain 169 377 IPR002913 GO:0008289
Lele02g0497 838 Gene3D - 17 91 - -
Lele02g0497 838 SUPERFAMILY Homeodomain-like 24 86 IPR009057 -
Lele02g0497 838 CDD START_ArGLABRA2_like 163 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0497 Lele-ChrLele02 2983208 2989436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0497 21 785 Homeobox Transcription Factor Family AT4G32880 77.022 0.0 1233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele02g0497 START 1.2e-50 CL0209
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0497 02 2983208 2989436 Lele02g0497 02 2983208 2989436 ECH
Lele02g0497 02 2983208 2989436 Lele03g0519 03 3043125 3048739 hybridization
Lele02g0497 02 2983208 2989436 Lele04g0517 04 3109340 3115630 hybridization