Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0496 ATGGCTAAAGGAGTTCATCAAACGTTTCCCAAGTGCCTCACATTCATGTGCCTGGCCATGCTGGTGTTCAATCTTGGCTCTTCACAATCTCATCATGGAGATCATCAACAAGAACTTCAGCTTCTGTTATCCCTCAAATCTTCTGCCAAGGACCCACGTCGGTCTCTTTCGAACTGGCTCCATTCTTCAGTCACCTTCTGTAACTGGCACGGCCTCACCTGCGACCACAGCTTTTCTCACGTTAACTCCGTCCAACTCTCAGGTCAAAACATATCCGGCACCATTTCCTCCTCCATATTTCAACTCCCAAACGTTACAAATATCGACCTCTCCAGCAATCAGTTCGCTGGTGAAATTTCTTTCTCCTTCCCTTCGTCTCTCTCGTCACTTTGTTTCCTTAACCTCAGCAACAATAACCTAACTGGCTCGTTGCCTGAGTTTTTGTTTTCTCTGTCGTTTTCCCGCCTGGAATACTTGGATCTTTCAAACAACATGTTTTCCGGGGTAATTCCACATCAGGTTGGTGTCCTTTCTAGTCTGCAATATCTTGATGTCGGAGGGAACGTTCTGGTGGGAGGAATTCCAAGTTCCATCACCAACATCACAGGTTTAGAATACTTGACATTGTCTTCGAACCAGTTAGTGGGTGAAATCCCACGTGACATAGGCGTAATGAAGAACTTGAAGTGGATTTACATGGGTTACAACAACCTCTCAGGTGAAATCCCGACGAGCATAGGGAACTTATTGTCTCTGCATCATCTCGACCTTGTTTACAACAATCTCACTGGATTCATTCCCGAGTCTCTTGGAAACCTCACCAATCTTGAGTTTCTGTTTCTCTACAAAAACAACCTCATCGGCCCAATCCCTCCTTCCATTTTCGACCTGAAAAAGCTTGTTTCGCTTGATCTCAGTGATAATTCTCTCTGGGGAGAGATTTCTGAACTTGCGATTAATCTTCAGAGACTGGAGATTCTTCAGCTTTTCTCAAACAACTTTACTGGAAAGATTCCGAGGGCTTTAGCAGCTTTACCTCGACTTCAAGTTCTTCAACTGTGGTCCAACAGATTAACGGGCGAGATCCCAAAAGAACTGGGAATGCATAGCAACCTCACTGTTGTAGACCTTTCCACCAACAACCTTTCCGGAGAGATCCCAAATGGCTTATGCGACTCGAGGAATCTTTTCAAGCTTATTCTTTTCTCCAACTCTCTTGAAGGACAAATCCCTCACAGTTTGAGCTCTTGCGCAAGCCTACGCCGAGTACGTCTCCAGAACAACAAGCTTTCCGGCCAGTTACCGTCTGAATTCGCCAAACTCCCACAGGTATACTTGTTAGACATGTCTGGCAATAAACTTTCCGGCAGGATCGATGATAGGAAGTGGGACATGCCGGCACTTCAGTTGCTGAATTTGGCTAAAAACAATTTCTCAGGAGAGTTACCCAACTCTTTCGGGAGCAACCAACTGGAGAACCTAGACTTAACGGAGAACCAGTTTTCTGGTTGTATTCCACCTGGTATGGGAACCTTATCGGAGCTCGTGCAGTTGAAGCTTAGCAGAAACAGGCTGTCCGGTAACATCCCAAATGAACTTTGTTCGTGCACGAAGCTCGTGTCTTTAGATCTCAGCCACAACCAGCTTAGCGGGCAAATACCGATTAGTCTAGGGGAGATGCCAGTTCTAGGGATGCTTGATCTGTCTGAAAACCAATTGTGGGGTGAAATTCCCGAAAATTTTGGAAGCGCCGAATCCCTTGTAGAACTCAACATAGCCTACAACCATTTTCATGGGAGGTTACCGTCAACTGGAGCTTTCCTCGCCATCAATAGCACTGACGTCGCTGGGAACGACCTTTGTGAGAGTGAAGATAGTGACAGTAGAATCGGTTTGCCACCCTGCACCAGAAGAGAAGATAATAATAAGAACCCGTTTTGGTGGTTTTTTCTGTTTGGTCTTGTAGGGTTACCGCTCGCAGCTTTTCTCATTGTCTTCATACGTAGAAGACAGAACTCGGAGGTGACCACAAAGCTGGAAAATGAAGACGGAACATGGGAAATGCGCTACTTAGACTCCAAGTCCTCAAAACTCATCACCATCCACGATGTATTATCTTCTGCAAAAGAGGGAGTACTCATAATCAACAAAGGACGAAAAGAGACAATGCGATTCGAGGTGAAAGAGATGAGTGACCTGAATTGCTTTCCGGAAGACGCTGGTAAGTTTCGGCATCCAAACATCGTGAAGTTGAAGGGAATATGCAGGTGTGGGAAAGGAGGGTACTTGGTGTATGAATACGTCGACGGGAAATATTTAAGCGACGTCGTTGGGAGTTTAAGCTGGGAACGACGACGGAATATTGCACTCGGAATAGCAAAAGCACTGAAGTATTTGCACGCTCATGGTTCAGCGTTTGCTTTGGTCGGCGAGATGTCACCGCAGAGAGTTGTGGTGGACGCAAAAGATGTTCCTCGTCTCATGTTGTTCCCTCTCAAGTCTTCCATTTCTTCACCTTACGTTGCTCCTGAATCAAGAAACGCGAAGGGGGTGACGGAGAAGAGTGACATGTACGGACTCGGCGTTATTCTGATAGAATTATTGACGGGAAGAAGTTCGGTGGACGAAGAAATGGGCATGCAGCAGGAAAGCATAGTGGAGCGGGCCCGTTATTGTTATTCGGACTGTCATCTGGATACATGGGTTGACCCGAACATGGAGGGTGGGATTGCATCGTCGGCTCAAAACGACATCGTCGAGGTCATGAACCTGGCCCTTCAGTGCACAGCCACTGATCCCACAGCTAGGCCCAGCGCAGGCCACGTGTTCAAAACCCTAAACGCTTTGACACCTTCCACATCGTCCTGTGTTTAA 2874 0.4669 MAKGVHQTFPKCLTFMCLAMLVFNLGSSQSHHGDHQQELQLLLSLKSSAKDPRRSLSNWLHSSVTFCNWHGLTCDHSFSHVNSVQLSGQNISGTISSSIFQLPNVTNIDLSSNQFAGEISFSFPSSLSSLCFLNLSNNNLTGSLPEFLFSLSFSRLEYLDLSNNMFSGVIPHQVGVLSSLQYLDVGGNVLVGGIPSSITNITGLEYLTLSSNQLVGEIPRDIGVMKNLKWIYMGYNNLSGEIPTSIGNLLSLHHLDLVYNNLTGFIPESLGNLTNLEFLFLYKNNLIGPIPPSIFDLKKLVSLDLSDNSLWGEISELAINLQRLEILQLFSNNFTGKIPRALAALPRLQVLQLWSNRLTGEIPKELGMHSNLTVVDLSTNNLSGEIPNGLCDSRNLFKLILFSNSLEGQIPHSLSSCASLRRVRLQNNKLSGQLPSEFAKLPQVYLLDMSGNKLSGRIDDRKWDMPALQLLNLAKNNFSGELPNSFGSNQLENLDLTENQFSGCIPPGMGTLSELVQLKLSRNRLSGNIPNELCSCTKLVSLDLSHNQLSGQIPISLGEMPVLGMLDLSENQLWGEIPENFGSAESLVELNIAYNHFHGRLPSTGAFLAINSTDVAGNDLCESEDSDSRIGLPPCTRREDNNKNPFWWFFLFGLVGLPLAAFLIVFIRRRQNSEVTTKLENEDGTWEMRYLDSKSSKLITIHDVLSSAKEGVLIINKGRKETMRFEVKEMSDLNCFPEDAGKFRHPNIVKLKGICRCGKGGYLVYEYVDGKYLSDVVGSLSWERRRNIALGIAKALKYLHAHGSAFALVGEMSPQRVVVDAKDVPRLMLFPLKSSISSPYVAPESRNAKGVTEKSDMYGLGVILIELLTGRSSVDEEMGMQQESIVERARYCYSDCHLDTWVDPNMEGGIASSAQNDIVEVMNLALQCTATDPTARPSAGHVFKTLNALTPSTSSCV 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0496 957 SUPERFAMILY L domain-like 320 648 - -
Lele02g0496 957 SUPERFAMILY L domain-like 36 378 - -
Lele02g0496 957 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 329 629 - -
Lele02g0496 957 Gene3D Ribonuclease Inhibitor 238 320 IPR032675 -
Lele02g0496 957 Gene3D Ribonuclease Inhibitor 37 152 IPR032675 -
Lele02g0496 957 ProSiteProfiles Leucine-rich repeat profile. 129 151 IPR001611 GO:0005515
Lele02g0496 957 ProSiteProfiles Protein kinase domain profile. 651 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele02g0496 957 Gene3D Transferase(Phosphotransferase) domain 1 733 954 - -
Lele02g0496 957 FunFam Leucine-rich repeat receptor protein kinase EMS1 153 243 - -
Lele02g0496 957 SMART LRR_typ_2 127 151 IPR003591 -
Lele02g0496 957 SMART LRR_typ_2 345 369 IPR003591 -
Lele02g0496 957 SMART LRR_typ_2 201 225 IPR003591 -
Lele02g0496 957 SMART LRR_typ_2 370 393 IPR003591 -
Lele02g0496 957 SMART LRR_typ_2 512 536 IPR003591 -
Lele02g0496 957 SMART LRR_typ_2 273 297 IPR003591 -
Lele02g0496 957 SMART LRR_typ_2 560 584 IPR003591 -
Lele02g0496 957 SMART LRR_typ_2 465 488 IPR003591 -
Lele02g0496 957 SMART LRR_typ_2 153 177 IPR003591 -
Lele02g0496 957 SMART LRR_typ_2 249 272 IPR003591 -
Lele02g0496 957 Gene3D Ribonuclease Inhibitor 153 237 IPR032675 -
Lele02g0496 957 Pfam Leucine rich repeat 251 310 IPR001611 GO:0005515
Lele02g0496 957 Pfam Leucine rich repeat 490 549 IPR001611 GO:0005515
Lele02g0496 957 Pfam Leucine rich repeat 154 214 IPR001611 GO:0005515
Lele02g0496 957 FunFam Leucine-rich repeat receptor-like kinase 37 152 - -
Lele02g0496 957 SUPERFAMILY Protein kinase-like (PK-like) 741 946 IPR011009 -
Lele02g0496 957 SMART LRR_sd22_2 297 316 - -
Lele02g0496 957 SMART LRR_sd22_2 225 251 - -
Lele02g0496 957 SMART LRR_sd22_2 177 203 - -
Lele02g0496 957 SMART LRR_sd22_2 273 292 - -
Lele02g0496 957 SMART LRR_sd22_2 536 557 - -
Lele02g0496 957 Pfam Leucine rich repeat N-terminal domain 36 75 IPR013210 -
Lele02g0496 957 Pfam Protein kinase domain 742 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele02g0496 957 Gene3D Ribonuclease Inhibitor 321 628 IPR032675 -
Lele02g0496 957 PANTHER UNNAMED PRODUCT 190 875 - -
Lele02g0496 957 FunFam Leucine-rich repeat receptor protein kinase EMS1 244 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0496 Lele-ChrLele02 2975473 2978435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0496 35 946 Receptor kinase-like Gene Family AT2G25790 50.913 0.0 852
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Singleton Lele02g0496 Pkinase 2.9e-17 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0496 02 2975473 2978435 Lele03g0518 03 3032787 3039775 hybridization
Lele02g0496 02 2975473 2978435 Lele04g0516 04 3101761 3104723 hybridization