Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0464 ATGGGGACTGGTTGGAGAAGAGCCTTTTGCACTCGCGACCCAGAATCCAGAGTTTCAGACAAGCAACAGAGAAGCCCGAGCCCCGGAAGCTGTGCCAAATTGGGTTTCTTCTCTAGTGGAAGCAACGCCTCCAGTACTCCCCGCTTACAAGGGTCCCGATCTCAAACTCTATCAAGTCCAAGCTTGCGTTGCCGAACCATGGCAGAAGCGGCTCAAACTGCAGCAGCTGGTGACAGCCCCAGATTTCAATGCAAAAACAGTACTACTCCCATGGCAACCAAATCCCCCAAGCCGCCACCCACCACCTCAAATCCAACTTCTCCTCGCTCGCCTTTGAAGTTGTCTCTCTTCAAACACAGCTTCAAATTTAGAAGTACTTGTGGGCTGTGTTTGAATAGCGTGAAGGCAGGTCAGGGCACGGCCATATATACAGCAGAATGTTCTCACGCTTTTCACTTTCCGTGTATCGTTGCTCATGTACGAAAGCACGGAAGCCTTGTCTGCCCAGTCTGCCGTGCCACCTGGAAAGACATACCTTTAACCGCCCTCCACAAGAACCCCTCCTCTGAATCATCTCAACTTGACGACGTCGTCGCTGAAAAGAGAATTGATCATACAAATGCCTGCGACAACAGCAGAACGGAAAACCCTTCCCCTTCAGTTTTCAAGACCCAGAACGTTGAACCACCACCACAGCAACGACACCATTCCAAGCATTCCGATGCAATCAGGTCCTACGACGATGACGAACCACTTCTATCTCCTACCTCCGGAGGTCGAATCATCACCATACCTGAAGCTGATGAAAACTGTGAAGATGACGACGACGTTGGGGAGTTCCAGGGCTTTTTTGTCGATCCCAGAACTTCATCCTCAATCAAATCCTCACAGGACTCCCGTGACTTACAAGCAAAAGACGAATCCAGAAATCTCCTGGTGAAATTGGTTCCGGAGTGCGCCATTGTTTCAGTCTCTCGCAACCACCAGACATGTGCTTTGGTTTTAAAAGTGAAGGCTCCGGCGGCTCGTAACACCAATAATATTGCATCGCCGCTTCTGGACCCGTCTCAAAGGGCGCCCATTGATCTTGTCACAGTTCTTGACGTGAGTGGCAGCATGACCGGAGCGAAGCTTCCCATGCTAAAGCGCGCTATGCGTTTGGTTATTTCGTCCCTCGGCCCAGCCGACAGGCTCTCCATAGTGGCTTTTTCGGCTAGAGCCAAACGATTATTACCTTTGAGAAGAATGTCGTCTCAAGGGCAGCGCGCGGCTCGCCGCATCATTGATCGGCTTGTCTGTGGCCAAGGAACTTGCGTGGGCGATGCTCTGAGGAAAGCCACCAAAGTGCTCGAGGACCGGAGGGAGAGAAACCCGGTGGCGAGCGTTATGCTCTTATCGGACGGCCAAGATGAGAGAGTACAATCTGGGGACCAAAATAATCAACGGAAAGGCTCCACTCACGGGCCTTGTACTCGTTTCGCTCACATCGAGATCCCGGTTCATGCCTTCGGGTTTGGACAGAAAGCCGGACACAGCCACGAGCCGGCTGAGGATGCGTTTGCTAAGTGCGTTGGTGGGTTATTGAGCGTGGTGGTGCAGGACTTGAGAATTCAGCTCGGCTTCCATGCAGGCTCGGCGCCGGCTGAAATTAGCGCCGTTTACTCATGCCGTGGAAGGCCCACGATGCTGAGCTCAGGGTCCGTGCGGCTCGGCGATTTGTACGCGGAAGAAGAGAAGGAGCTTCTGGTGGAGCTGAGAGTTCCTTCTTCAGCTTACGGGGCCCACCACGTGATGACGGTACGGTGCGTTTTCCAAGACCCTGCCACTCAGGAGATTGTCTACGGTGGGGAACAGAGTATTATGGTACCGCCACCTCAAACGTCACGAGGTTCCGGCGTCAGAATCGAGAGGTTGAGGAACCTGTTCGTAACAACGAGGGCCATAGCCGAGTCTCGGAGATTGATGGAGCACAATGACTTCACAAGCGCGCATCATTTGCTAGCTTCGAGTCGAGCTCTTCTGATGCAGTCGAGCTTGATTTCGGCTGACGAGTTCATTAGCGGCTTGGAGGCTGAGCAGGCAGAACTGCACTGGCGGAGACAGCACCAGATGGAGAAGATTCAGCGGCAGCAGGTGATGGTGATGCAACGGAGGAGAGGCAGTGAAAGAGAAACCTCGTGGGCTGTGGATGAAGACGGGGAACCACTGACGCCAACATCGGCTTGGAGAGCAGCAGAGAAGCTGGCCAAGATGGCCATGATGAAGAAGTCGTTGAACCGTGTTAGCGACTTGCACGGCTTCGAAAACGCTAGATTTTAA 2319 0.5317 MGTGWRRAFCTRDPESRVSDKQQRSPSPGSCAKLGFFSSGSNASSTPRLQGSRSQTLSSPSLRCRTMAEAAQTAAAGDSPRFQCKNSTTPMATKSPKPPPTTSNPTSPRSPLKLSLFKHSFKFRSTCGLCLNSVKAGQGTAIYTAECSHAFHFPCIVAHVRKHGSLVCPVCRATWKDIPLTALHKNPSSESSQLDDVVAEKRIDHTNACDNSRTENPSPSVFKTQNVEPPPQQRHHSKHSDAIRSYDDDEPLLSPTSGGRIITIPEADENCEDDDDVGEFQGFFVDPRTSSSIKSSQDSRDLQAKDESRNLLVKLVPECAIVSVSRNHQTCALVLKVKAPAARNTNNIASPLLDPSQRAPIDLVTVLDVSGSMTGAKLPMLKRAMRLVISSLGPADRLSIVAFSARAKRLLPLRRMSSQGQRAARRIIDRLVCGQGTCVGDALRKATKVLEDRRERNPVASVMLLSDGQDERVQSGDQNNQRKGSTHGPCTRFAHIEIPVHAFGFGQKAGHSHEPAEDAFAKCVGGLLSVVVQDLRIQLGFHAGSAPAEISAVYSCRGRPTMLSSGSVRLGDLYAEEEKELLVELRVPSSAYGAHHVMTVRCVFQDPATQEIVYGGEQSIMVPPPQTSRGSGVRIERLRNLFVTTRAIAESRRLMEHNDFTSAHHLLASSRALLMQSSLISADEFISGLEAEQAELHWRRQHQMEKIQRQQVMVMQRRRGSERETSWAVDEDGEPLTPTSAWRAAEKLAKMAMMKKSLNRVSDLHGFENARF 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0464 772 SUPERFAMILY RING/U-box 126 178 - -
Lele02g0464 772 MobiDBLite consensus disorder prediction 206 304 - -
Lele02g0464 772 SMART ring_2 127 171 IPR001841 -
Lele02g0464 772 MobiDBLite consensus disorder prediction 232 248 - -
Lele02g0464 772 Pfam RING-like zinc finger 127 156 IPR001841 -
Lele02g0464 772 ProSiteProfiles Zinc finger RING-type profile. 127 172 IPR001841 -
Lele02g0464 772 SMART VWA_4 360 545 IPR002035 -
Lele02g0464 772 ProSiteProfiles VWFA domain profile. 362 507 IPR002035 -
Lele02g0464 772 MobiDBLite consensus disorder prediction 21 66 - -
Lele02g0464 772 MobiDBLite consensus disorder prediction 1 110 - -
Lele02g0464 772 MobiDBLite consensus disorder prediction 460 488 - -
Lele02g0464 772 Pfam von Willebrand factor type A domain 363 469 IPR002035 -
Lele02g0464 772 MobiDBLite consensus disorder prediction 471 487 - -
Lele02g0464 772 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 118 182 IPR013083 -
Lele02g0464 772 Gene3D von Willebrand factor, type A domain 362 529 IPR036465 -
Lele02g0464 772 MobiDBLite consensus disorder prediction 210 231 - -
Lele02g0464 772 CDD vWA_C3HC4_type 361 532 - -
Lele02g0464 772 PANTHER CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR 125 767 - -
Lele02g0464 772 SUPERFAMILY vWA-like 360 535 IPR036465 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0464 Lele-ChrLele02 2792801 2795220 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0464 114 276 C3H Transcription Factor Family AT3G03550 25.862 1.92e-06 48.9