Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele02g0463 | ATGTCTACACTGCTGCTCGGCATAGGGGAGGACAAAGGTCGAAGCGATGTCAATTTGTTGGCCTCTTCAACCACCATGGAAAGTGTTTGCCTCAACAGCTCCAAACTGAAAGAACGCAACTACATGGGTTTATCTGATTGTTCTTCAGTGGACAGCTCAGCTCAGTCCTTCTCGGACGAGAGTAAAACCAAGCTGAACCTAAAAGCTACAGAGCTGAGGCTTGGGCTTCCGGGATCTCAGTCTCCTGAAAGAGAAGACTCAGATCATCACTGCTTTGAAAGTTCAACTCAATTTGATGAGAAACCTCTTTTTCCCTTGCACCCTTCAATGGATGATCAACACCGCTCGTCAAAGAATGTTGTTCTGGGTAACAAAAGAGGGTTCTCAGATGCTATGAATGAGTTCTCCAAGGGGCAATTCCTGGCCAATTCGGAGGGGAATACAATTTTGTCACCTAGATCATCTCCTAATTTGGGATTGAAAACTAGTTCTATTCTTGATAAAGCGAAAGAAGCACCACCACCAAAGGTGGAACAAGAGAGTCCCCATATTGTGAACGAAACCAAACCAAACCATAATGTTTCTGCAAATAATAGCAGTACACCTGCTTCTAAGGTACAGGTTGTGGGTTGGCCTCCTATTAGATCATTTAGGAAAAATTCATTGGCCGCCACTACGAAAAATACTGAAGAAGTAGATGGGAAAGCACTGTTTGTCAAGGTCAGTATGGATGGTGCTCCATATTTAAGGAAAGTAGACTTGAAGAATTACAGTGCATATCCAGAACTATCTTCTTCTCTGGAGAAGATGTTCAGTTGTTTTACCATAGGTCAATGTGGATCTAATGGAACTCTGGGTAAGGGGATACTGAATGAAAGCAAGATGAGAGATCTGCTTCGAGGGTCCGAATATGTTCTTACTTATGAGGACAAAGAAGGTGACTGGATGCTTGTGGGTGATGTTCCATGGGAGATGTTTGTTGAAACATGCAGGAGGATGAGGATCATGAAGAGCTCTGAAGCCATCGGTTTAGCTCCCAGAAAGAAATAA | 1050 | 0.4343 | MSTLLLGIGEDKGRSDVNLLASSTTMESVCLNSSKLKERNYMGLSDCSSVDSSAQSFSDESKTKLNLKATELRLGLPGSQSPEREDSDHHCFESSTQFDEKPLFPLHPSMDDQHRSSKNVVLGNKRGFSDAMNEFSKGQFLANSEGNTILSPRSSPNLGLKTSSILDKAKEAPPPKVEQESPHIVNETKPNHNVSANNSSTPASKVQVVGWPPIRSFRKNSLAATTKNTEEVDGKALFVKVSMDGAPYLRKVDLKNYSAYPELSSSLEKMFSCFTIGQCGSNGTLGKGILNESKMRDLLRGSEYVLTYEDKEGDWMLVGDVPWEMFVETCRRMRIMKSSEAIGLAPRKK | 349 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele02g0463 | 349 | PANTHER | AUXIN-RESPONSIVE PROTEIN IAA17 | 64 | 343 | IPR003311 | GO:0005634|GO:0006355 | |
Lele02g0463 | 349 | Gene3D | - | 230 | 348 | - | - | |
Lele02g0463 | 349 | FunFam | Auxin-responsive protein | 231 | 348 | - | - | |
Lele02g0463 | 349 | MobiDBLite | consensus disorder prediction | 82 | 96 | - | - | |
Lele02g0463 | 349 | ProSiteProfiles | PB1 domain profile. | 236 | 338 | IPR000270 | GO:0005515 | |
Lele02g0463 | 349 | SUPERFAMILY | CAD & PB1 domains | 231 | 337 | - | - | |
Lele02g0463 | 349 | Pfam | AUX/IAA family | 70 | 347 | IPR033389 | - | |
Lele02g0463 | 349 | MobiDBLite | consensus disorder prediction | 75 | 100 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele02g0463 | Lele-ChrLele02 | 2783158 | 2785142 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele02g0463 | 250 | 341 | B3 DNA Binding Superfamily | AT1G19220 | 35.870 | 5.81e-09 | 55.8 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | AUX/IAA | Lele02g0463 | AUX_IAA | 7.3e-89 | CL0072 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele02g0463 | 02 | 2783158 | 2785142 | Lele02g0463 | 02 | 2783158 | 2785142 | ECH | |
Lele02g0463 | 02 | 2783158 | 2785142 | Lele03g0486 | 03 | 2831905 | 2833872 | hybridization | |
Lele02g0463 | 02 | 2783158 | 2785142 | Lele04g0483 | 04 | 2902711 | 2904640 | hybridization |