Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0463 ATGTCTACACTGCTGCTCGGCATAGGGGAGGACAAAGGTCGAAGCGATGTCAATTTGTTGGCCTCTTCAACCACCATGGAAAGTGTTTGCCTCAACAGCTCCAAACTGAAAGAACGCAACTACATGGGTTTATCTGATTGTTCTTCAGTGGACAGCTCAGCTCAGTCCTTCTCGGACGAGAGTAAAACCAAGCTGAACCTAAAAGCTACAGAGCTGAGGCTTGGGCTTCCGGGATCTCAGTCTCCTGAAAGAGAAGACTCAGATCATCACTGCTTTGAAAGTTCAACTCAATTTGATGAGAAACCTCTTTTTCCCTTGCACCCTTCAATGGATGATCAACACCGCTCGTCAAAGAATGTTGTTCTGGGTAACAAAAGAGGGTTCTCAGATGCTATGAATGAGTTCTCCAAGGGGCAATTCCTGGCCAATTCGGAGGGGAATACAATTTTGTCACCTAGATCATCTCCTAATTTGGGATTGAAAACTAGTTCTATTCTTGATAAAGCGAAAGAAGCACCACCACCAAAGGTGGAACAAGAGAGTCCCCATATTGTGAACGAAACCAAACCAAACCATAATGTTTCTGCAAATAATAGCAGTACACCTGCTTCTAAGGTACAGGTTGTGGGTTGGCCTCCTATTAGATCATTTAGGAAAAATTCATTGGCCGCCACTACGAAAAATACTGAAGAAGTAGATGGGAAAGCACTGTTTGTCAAGGTCAGTATGGATGGTGCTCCATATTTAAGGAAAGTAGACTTGAAGAATTACAGTGCATATCCAGAACTATCTTCTTCTCTGGAGAAGATGTTCAGTTGTTTTACCATAGGTCAATGTGGATCTAATGGAACTCTGGGTAAGGGGATACTGAATGAAAGCAAGATGAGAGATCTGCTTCGAGGGTCCGAATATGTTCTTACTTATGAGGACAAAGAAGGTGACTGGATGCTTGTGGGTGATGTTCCATGGGAGATGTTTGTTGAAACATGCAGGAGGATGAGGATCATGAAGAGCTCTGAAGCCATCGGTTTAGCTCCCAGAAAGAAATAA 1050 0.4343 MSTLLLGIGEDKGRSDVNLLASSTTMESVCLNSSKLKERNYMGLSDCSSVDSSAQSFSDESKTKLNLKATELRLGLPGSQSPEREDSDHHCFESSTQFDEKPLFPLHPSMDDQHRSSKNVVLGNKRGFSDAMNEFSKGQFLANSEGNTILSPRSSPNLGLKTSSILDKAKEAPPPKVEQESPHIVNETKPNHNVSANNSSTPASKVQVVGWPPIRSFRKNSLAATTKNTEEVDGKALFVKVSMDGAPYLRKVDLKNYSAYPELSSSLEKMFSCFTIGQCGSNGTLGKGILNESKMRDLLRGSEYVLTYEDKEGDWMLVGDVPWEMFVETCRRMRIMKSSEAIGLAPRKK 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0463 349 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 64 343 IPR003311 GO:0005634|GO:0006355
Lele02g0463 349 Gene3D - 230 348 - -
Lele02g0463 349 FunFam Auxin-responsive protein 231 348 - -
Lele02g0463 349 MobiDBLite consensus disorder prediction 82 96 - -
Lele02g0463 349 ProSiteProfiles PB1 domain profile. 236 338 IPR000270 GO:0005515
Lele02g0463 349 SUPERFAMILY CAD & PB1 domains 231 337 - -
Lele02g0463 349 Pfam AUX/IAA family 70 347 IPR033389 -
Lele02g0463 349 MobiDBLite consensus disorder prediction 75 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0463 Lele-ChrLele02 2783158 2785142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0463 250 341 B3 DNA Binding Superfamily AT1G19220 35.870 5.81e-09 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lele02g0463 AUX_IAA 7.3e-89 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0463 02 2783158 2785142 Lele02g0463 02 2783158 2785142 ECH
Lele02g0463 02 2783158 2785142 Lele03g0486 03 2831905 2833872 hybridization
Lele02g0463 02 2783158 2785142 Lele04g0483 04 2902711 2904640 hybridization