Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele02g0459 | ATGGTGGTGAGGAAGGTGGGGAAGTACGAAATCGGGAGGACAATTGGGGAGGGAACCTTCGCCAAGGTAAAGTTCGCTCAGAACACAGAGACTGGCGAGAGTGTCGCTATGAAAGTGCTCGACCGTAGCACCATCATCAAGCACAAGATGGTCGATCAGGCAAGCAGTTTAGATGTTGATGTTGCAATATCAAGAAGGAGATTTTTTATTATTAAGCTATTTCGACATCCATATGTTGTTCGTCTGCATGAGGTTCTAGCAAGTCGTACTAAGATTTACATCATATTGGAGTTCATTACAGGTGGTGAATTGTTTGACAAAATTGTACACCATGGCCGTCTTAGTGAAGCTGAAGCTAGAAAATACTTCCAACAGCTTATTGATGGTGTGGATTATTGCCACAGTAAGGGAGTCTATCACAGAGATTTAAAGGGGGTTAGTGTCCTTCGGACAACTTGTGGGACTCCAAACTATGTAGCCCCTGAGGTACTTAGTCACAAGGGTTACAATGGAGCAGCGGCAGATGTTTGGTCCTGTGGGGTTATTCTTTATGTTCTAATTGCTGGATATCTCCCCTTTGATGAGCTGGATCTAACTACCTTATACAAGTTTTCAATCCCTTCATGGTTTCCTGTGGGAGCAAAATCTTTAATACATAGAATTTGGGACCCAAATCCTGAAACTCGCATTACCATTGAACAGCTAAGAAGTGATGAGGGGTTTCATAAGAACTATGTTCCTGCCAGTCTTCTTGAGTATGAAGATGTGAATCTGGATGATGTAAATGCAGCTTTTGATGATGCTGAGAGAGTCAATCAACAATGTGAGAATGAAGACGGGGTTCCATTAATGCTTAATGCATTTGACTTGATAATTCTTTCTCAAGGTTTAAATCTTGCAACAATCTTTGATCGTGGACGGGATTCCATGAAGTACCAAACACGCTTTATCTCTCAAAAGCCAGCAAAGGTGGTTTTATCAAGCATGGAAGTTGTGGCTCAATCAATGGGATTTAAGACACATATTCGCAACTATAAGATTTTTGAAGTTGCTCCATCATTCTTCATGGTGGACATTCAAAAAGCAGCTGGAGACGTAGGTGAATACCTCAAGTTTTACAAGAACTTCTGTAGCAATCTTGATGATATCATCTGGAAACCGCCTTATGAAGAAAGCCAATCAAGGAGCTCCACCAATAAAAGTAGAAGGCGATCCTCTCACTTCATGTGA | 1230 | 0.4154 | MVVRKVGKYEIGRTIGEGTFAKVKFAQNTETGESVAMKVLDRSTIIKHKMVDQASSLDVDVAISRRRFFIIKLFRHPYVVRLHEVLASRTKIYIILEFITGGELFDKIVHHGRLSEAEARKYFQQLIDGVDYCHSKGVYHRDLKGVSVLRTTCGTPNYVAPEVLSHKGYNGAAADVWSCGVILYVLIAGYLPFDELDLTTLYKFSIPSWFPVGAKSLIHRIWDPNPETRITIEQLRSDEGFHKNYVPASLLEYEDVNLDDVNAAFDDAERVNQQCENEDGVPLMLNAFDLIILSQGLNLATIFDRGRDSMKYQTRFISQKPAKVVLSSMEVVAQSMGFKTHIRNYKIFEVAPSFFMVDIQKAAGDVGEYLKFYKNFCSNLDDIIWKPPYEESQSRSSTNKSRRRSSHFM | 409 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele02g0459 | 409 | Coils | Coil | 258 | 278 | - | - | |
| Lele02g0459 | 409 | Pfam | Protein kinase domain | 9 | 145 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Lele02g0459 | 409 | Pfam | Protein kinase domain | 149 | 237 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Lele02g0459 | 409 | Gene3D | Kinase associated domain 1, KA1 | 284 | 386 | - | - | |
| Lele02g0459 | 409 | SUPERFAMILY | Protein kinase-like (PK-like) | 6 | 262 | IPR011009 | - | |
| Lele02g0459 | 409 | ProSiteProfiles | Protein kinase domain profile. | 9 | 245 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Lele02g0459 | 409 | ProSiteProfiles | NAF domain profile. | 280 | 304 | IPR018451 | GO:0007165 | |
| Lele02g0459 | 409 | Pfam | NAF domain | 282 | 340 | IPR004041 | GO:0007165 | |
| Lele02g0459 | 409 | ProSitePatterns | Protein kinases ATP-binding region signature. | 15 | 47 | IPR017441 | GO:0005524 | |
| Lele02g0459 | 409 | CDD | CIPK_C | 286 | 382 | - | - | |
| Lele02g0459 | 409 | PANTHER | CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED | 7 | 369 | - | - | |
| Lele02g0459 | 409 | Gene3D | Transferase(Phosphotransferase) domain 1 | 148 | 283 | - | - | |
| Lele02g0459 | 409 | Gene3D | Transferase(Phosphotransferase) domain 1 | 3 | 147 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele02g0459 | Lele-ChrLele02 | 2747288 | 2752440 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele02g0459 | 1 | 347 | CBL-interacting serine-threonine protein kinases | AT4G24400 | 71.204 | 0.0 | 537 |
Transcription factors information