Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0419 ATGCTGACCTCGATTTCAACTATTCTAGACTTCTTCAACACAAAGGGTATCCTGGAGCCTGGAGATAAATTTTATCGGGGGAGTGATTCAGGAGACGAGGGACTTCAATTCAAAACTGGGAATTTCGGATATCGCGAATTTTTCTTCTTAGCCATCGTTTTTGTTTTAGGGTTTCTATCTTCTGCGATGGCTGCCAATTCGCATGGAGGTGGTTCTTCTTTTGGCCATGCTGCCCCTTATCGTTCAAGATGCAGAGAGGGCCTCACCACGAGATCAGTTGCTGGTTCGAATGAAATCCAATTGCGTATTGATCCGATGGACTTGGACGACGAGATCAGCGGTCTTCGTGGCCAAGTTAGAAAATTGAGAAATGTTGCCGAGGAGATTGGGACAGAAGTTAAGTATCAGAAAGATTTTCTGGAACAACTGCAAATAACAATGATAAAGGCCCAGGCTGGGGTGAAGAATAATTTAAGAAGATTGAACAAGAGCATAATCCAAAATGGTTCAAACCATATCGTTCACGTGATTGTATTTGCATTAGTCTGTTTCTTTATGGTGTACCTTTGGTCCAAAAGGTCCAGAAAATGA 591 0.4247 MLTSISTILDFFNTKGILEPGDKFYRGSDSGDEGLQFKTGNFGYREFFFLAIVFVLGFLSSAMAANSHGGGSSFGHAAPYRSRCREGLTTRSVAGSNEIQLRIDPMDLDDEISGLRGQVRKLRNVAEEIGTEVKYQKDFLEQLQITMIKAQAGVKNNLRRLNKSIIQNGSNHIVHVIVFALVCFFMVYLWSKRSRK 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0419 196 SUPERFAMILY SNARE fusion complex 106 163 - -
Lele02g0419 196 CDD SNARE_Qc 107 163 - -
Lele02g0419 196 Gene3D - 107 164 - -
Lele02g0419 196 FunFam Bet1-like protein At4g14600 108 166 - -
Lele02g0419 196 PANTHER GOLGI SNARE BET1-RELATED 84 192 IPR039897 -
Lele02g0419 196 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 109 164 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0419 Lele-ChrLele02 2420286 2424327 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele27g1707 27 22431456 22432519 Lele02g0419 02 2420286 2424327 CCT
Lele28g0386 28 2373710 2374784 Lele02g0419 02 2420286 2424327 CCT
Lele02g0419 02 2420286 2424327 Lele04g0427 04 2522055 2524502 hybridization