Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0417 ATGCCAGAAAACGGGGCAGCATCGGAGCGACCGAAGAGGAGCACCAAGAGACTCCTTTTCTTACTAAATTGCTTCTTGCTCTGCCTAGGCACCGGCGGTGGCCCTCTCATAAGTCGTCTCTACTTCCTCCACGGCGGCAAACGCGTCTGGCTATCCAGCTGGCTCCAAACCGCCGGCTTCCCCCTCTGCCTCCTTCCTCTATCCATCTCTTACATTCGCAGCCGCCTCTCCCAGCAACCCAAGCCCTTCGCCTTCATCGACGCTCGCCTTTTTCTTGCAGCCTTTGTCATCGGTGTCTTCACCGGCCTCGATGATTACCTCTATGCTTACGGCTTAGCTCGCCTCCCTGTTTCCACTTCCGCTCTCCTCATCGCCACCCAGCTGGCTTTCACCGCCTCCTTCGCCTTCCTCCTCGTCAGGCAGAAGTTCACCCCTTTCTCCATAAACGCCGTCTTCCTGCTCACCGTTGGAGCCGCTGTCCTGGCTCTTCATTCATCCGGTGATCGTCCCCAAGGTGAGTCCACCAAGCAGTATGTGCTGGGGTTCGTGTTGACTCTGGTGGCGGCGGCCTTGTATGGTTTCTTGTTGCCTCTGATAGAGCTCATGTACAGCAAGAGCAGGCAGCCTTTGACCTACACGCTGGTCATTCAGATTCAGTTCGTGATCAGCTTCGGTGCTACTATGTTCTGTACCGTTGGGATGCTCGTCAACAACGACTTCAAGGTGATGGGAAGAGAAGCGAGAGAATTTGGGCTGGGGGGAACAAGATATTACGTGGTGCTGGTGTTTAGCGCGATCATGTGGCAGTTCTTCTTTGTGGGAGCTATAGGGGTTGTCTTTTGTGCGTCTTCATTGCTCTCAGGCATTATAATCGCCGTGATGCTGCCGTTGACTGAAGTGTTGGCGGTGATTTTCTACAAAGAGAGTTTCACGGCAGAGAAAGGAGTCAGCCTGGGTCTCTCAGTCTGGGGCTTTCTGTCCTACTTCTATGGAGAGTATAAAGTAACCCAGAAGAACAAGCAAACCGATGCCACCCCTCAAACCGAGTTGACTTCAAGTATTCCTAATCCATGA 1074 0.5345 MPENGAASERPKRSTKRLLFLLNCFLLCLGTGGGPLISRLYFLHGGKRVWLSSWLQTAGFPLCLLPLSISYIRSRLSQQPKPFAFIDARLFLAAFVIGVFTGLDDYLYAYGLARLPVSTSALLIATQLAFTASFAFLLVRQKFTPFSINAVFLLTVGAAVLALHSSGDRPQGESTKQYVLGFVLTLVAAALYGFLLPLIELMYSKSRQPLTYTLVIQIQFVISFGATMFCTVGMLVNNDFKVMGREAREFGLGGTRYYVVLVFSAIMWQFFFVGAIGVVFCASSLLSGIIIAVMLPLTEVLAVIFYKESFTAEKGVSLGLSVWGFLSYFYGEYKVTQKNKQTDATPQTELTSSIPNP 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0417 357 Pfam Purine nucleobase transmembrane transport 20 337 - -
Lele02g0417 357 PANTHER OS09G0467300 PROTEIN-RELATED 9 342 IPR030182 GO:0015211|GO:0016020
Lele02g0417 357 SUPERFAMILY Multidrug resistance efflux transporter EmrE 86 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0417 Lele-ChrLele02 2416280 2417444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0417 30 350 Organic Solute Cotransporters AT1G28230 57.704 6.98e-135 387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele27g1712 27 22447859 22453014 Lele02g0417 02 2416280 2417444 CCT
Lele25g0374 25 2273714 2281875 Lele02g0417 02 2416280 2417444 CCT
Lele02g0417 02 2416280 2417444 Lele02g0417 02 2416280 2417444 ECH
Lele02g0417 02 2416280 2417444 Lele04g0425 04 2518355 2519519 hybridization