Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0414 ATGTCAGTCCCCTGCCACACTCGCCCTCCTCCCATCCTCCCACCCTCCAATTTCGATCATCACCATGGCCTGCGCTGCCTTACCCTCTTTCTACTCTCCTTCCCGGCCACCGCGCAGTTCCTGGCGGCGCCCCCTCCTCCGCCCACCGACCCCTTTGCCCGGCTTAAGTTTGACAAGAACATGGCCATCATCATGGTCATCCTGGTCCTCGTCTTCTTCATTCTGGGCTTCCTTTCCATCTACACTCGCCAATGCGCGGAGCGCCGAATGAGGGGCAGACTCGACCTCGCTCTCCCGATCGGCATCAGCAACCGGCGACAGCGCGGTCTTGACCCCGAGATCATCGACAGTTTCCCCACTTTCGTTTACTCCTCCGTCAAGGGGCTTAAGCTGGGGAGGACCTCCCTGGAATGCGCCGTCTGCTTGAACGAGTTCGAAGACGATGAGACTCTGCGTTTGATCCCCAAATGCAGCCACGTGTTTCACCCTGATTGTATCGATCTCTGGCTTTCTTCTCACTCCACCTGCCCCCTTTGCCGGGCCAACCTTATTCCTAAACCCGGTGATTCCTCCTTTGTCGCCATTCAGATCCCCAATCCGGACGCCGATTCCGCCCAGCCTGATTCAAGTTCTAATTCCGGTGAGGTCCCCCAGGACAACGTCAACACGGCGGCACCCGGGTCGTCTCCGATTCTGAGCCGAAATCCCACCGTGAACCGGAGCCGGACACCTAGGTCAAAGTCAACGGGGTTTCGACTGGCCGGCTTATTCCCACGTTCTCACTCCACGGGTCATTCCCTGCAGGTTCAGTCAGGAGATAATTGGGAAAGGTTCACTCTGAGATTGCCGGAGGACGCCCGAAAGAAGTTACTAAAGCGAACAAATAGTTGTGTGGCGTTCACGAGGGAGAGCAGTCAGAGGAGGGGTTATAGGACAAGAAGTGTGGGGAGTGGACGGGGAAGGAACTATTTCCAGTACGAGCGATTCGGAGGCGAGGGGCGGCCGGAGCAATGGGGATTCACGGTGAGGCCTCCGTTTTTGAGCAGGAGTGGTTCGACGGTGGCTAACAAGGGACCGGTGGGTCCATCGGGGGTGGCCATGGACGACATCGGGGAACGGTCTTCTGATCCATTGTTTACGGGAAACAAAGATTCGATAGGAAGATAG 1167 0.5733 MSVPCHTRPPPILPPSNFDHHHGLRCLTLFLLSFPATAQFLAAPPPPPTDPFARLKFDKNMAIIMVILVLVFFILGFLSIYTRQCAERRMRGRLDLALPIGISNRRQRGLDPEIIDSFPTFVYSSVKGLKLGRTSLECAVCLNEFEDDETLRLIPKCSHVFHPDCIDLWLSSHSTCPLCRANLIPKPGDSSFVAIQIPNPDADSAQPDSSSNSGEVPQDNVNTAAPGSSPILSRNPTVNRSRTPRSKSTGFRLAGLFPRSHSTGHSLQVQSGDNWERFTLRLPEDARKKLLKRTNSCVAFTRESSQRRGYRTRSVGSGRGRNYFQYERFGGEGRPEQWGFTVRPPFLSRSGSTVANKGPVGPSGVAMDDIGERSSDPLFTGNKDSIGR 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0414 388 Pfam Ring finger domain 137 180 IPR001841 -
Lele02g0414 388 MobiDBLite consensus disorder prediction 348 388 - -
Lele02g0414 388 CDD RING-H2_EL5_like 137 180 - -
Lele02g0414 388 PANTHER RING FINGER DOMAIN-CONTAINING 44 183 - -
Lele02g0414 388 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 101 185 IPR013083 -
Lele02g0414 388 SMART ring_2 138 179 IPR001841 -
Lele02g0414 388 MobiDBLite consensus disorder prediction 194 268 - -
Lele02g0414 388 FunFam E3 ubiquitin-protein ligase ATL6 100 186 - -
Lele02g0414 388 ProSiteProfiles Zinc finger RING-type profile. 138 180 IPR001841 -
Lele02g0414 388 SUPERFAMILY RING/U-box 119 188 - -
Lele02g0414 388 MobiDBLite consensus disorder prediction 202 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0414 Lele-ChrLele02 2402101 2403267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0414 19 350 Rapid Response to Elicitors AT3G05200 39.655 5.21e-64 208