Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0412 ATGAGGCTTAGTAAACCAGACGGGTTGAAAAACAGGGATCTGAACCTACTGGCGAAGGATAAAGTTATAAGGCCGACGAGGCCCTCGACCCCCGTAAAGGGAGAAGGATCTCTCAGAAACCCTGCTACCACGGTCTCCGCAATTTCCAGATATTTTGCACTCGCGAACGAATTCGGTGAACCCAAACAGCACACGTTTTCTCCCAGACCCTGGCTAGAGATATCTACAAGACACGCAAGCAACTCTCTTCTGTTGACCATTTTTTGCGTCATGCGGGGACGGGGATCAGAGATTGGAAGCTCAACTATTTTAAATGCAAGCCGAGGGAATAATCGTAGAGCCGATTTGATTAACGATGCACATATTATATCTTATGGTGTACATGCTAGCAATAACCCCCCCGGTACATGGAGAGAACCAAGAAAAACAGAGAATGTCTCATCGAGATGTGCCGGGCTCTGGGCTTATGCTACCTACCTTTCTCAGTTTCCTCCTTTCCTTCCCCAAACTCTTCTTCTACAGCATCTCACCGTTAGCCCTATATCCTTATCTTCCCCTCGCTCTCTGTTTCTCAGCACCTTGCTGGCGAAAAAGAGTAGTGTGTCCTTTAGTGAGCAACAGGGAGAGCCACGTCAAACTCTGATCCGATCCAAGTCAACAATAATGGCCCTAGAGGCTGTAGTTTTCTCACAGGATCCCTTCCCGTATAGTTGCTGCAAGGACTCGTACTCCATTGCCGCAGCTTGGAACCCCGACGACCATGGCTTCCATGCAGAAGAGGAGAAATCCCCTGTCGGAGTACTCATCAACAGTAACATAGAACACAGGCATGTCCATGAAACTTGGTATTCTAACTCTTCTCCAGAGGCCTACACCGACCGCCGATCCCTGATCTCCCCCGCTCCCTCGGGTAGGCGTAAACGACGTCGCACCAAGAGCGCCAAGAACAAGGAGGACCTGGAGAACCAGAGGATGACTCACATTGCGGTGGAGCGTAATCGGCGGAGACAGATGAATGACTACCTGGCGGTGCTCCGTTCCTTGATGCCTCCATCTTACGTTCAAAGGGGGGACCAAGCGTCTATAATAGGAGGCGCCATTAACTTTGTGAAGGAGCTAGAACAGCTACTGCAGTCAATGGAGGGACGAAAGAAGAAGACGAAGCAGCAAGATCAAGAGAGTGGGACGTGTAGCTCGCCCTTCGCCGAGTTCTTCACATTCCCGCAGTACTCCACTCATGCAAATCACTGCAATACCAGCTCCCAGCAATGGGCCGTCGCTGACATTGAAGTCACCATGGTCGACACCCACGCCAACCTCAAGATACTCTCCAAGAAACGTTCCGGCCAGCTCACCAAGATCGTCGTCGGCCTTCAAGCTCTCAGGCTCACCGTTCTCCACCTCAACGCTACCACTCATGACGACATGGTCCTCTACTCTGCCAGCGTCAAGCTTGAAGATGGGTGTGATCTGAATACGGTGGATGAAATCGCTGCTGCCGTGAATCAACTATTGCGCAGAATCCAGGAGGAATCGCCTTTCTGCTGA 1548 0.5103 MRLSKPDGLKNRDLNLLAKDKVIRPTRPSTPVKGEGSLRNPATTVSAISRYFALANEFGEPKQHTFSPRPWLEISTRHASNSLLLTIFCVMRGRGSEIGSSTILNASRGNNRRADLINDAHIISYGVHASNNPPGTWREPRKTENVSSRCAGLWAYATYLSQFPPFLPQTLLLQHLTVSPISLSSPRSLFLSTLLAKKSSVSFSEQQGEPRQTLIRSKSTIMALEAVVFSQDPFPYSCCKDSYSIAAAWNPDDHGFHAEEEKSPVGVLINSNIEHRHVHETWYSNSSPEAYTDRRSLISPAPSGRRKRRRTKSAKNKEDLENQRMTHIAVERNRRRQMNDYLAVLRSLMPPSYVQRGDQASIIGGAINFVKELEQLLQSMEGRKKKTKQQDQESGTCSSPFAEFFTFPQYSTHANHCNTSSQQWAVADIEVTMVDTHANLKILSKKRSGQLTKIVVGLQALRLTVLHLNATTHDDMVLYSASVKLEDGCDLNTVDEIAAAVNQLLRRIQEESPFC 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0412 515 Coils Coil 370 390 - -
Lele02g0412 515 Gene3D - 312 397 IPR036638 GO:0046983
Lele02g0412 515 SMART finulus 328 379 IPR011598 GO:0046983
Lele02g0412 515 MobiDBLite consensus disorder prediction 289 322 - -
Lele02g0412 515 CDD bHLH_AtFAMA_like 325 394 - -
Lele02g0412 515 Pfam Helix-loop-helix DNA-binding domain 323 374 IPR011598 GO:0046983
Lele02g0412 515 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 322 373 IPR011598 GO:0046983
Lele02g0412 515 PANTHER MAX DIMERIZATION, MAD 278 511 - -
Lele02g0412 515 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 322 393 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0412 Lele-ChrLele02 2392493 2398829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0412 222 485 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 49.492 3.38e-72 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele02g0412 HLH 7.4e-10 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0412 02 2392493 2398829 Lele02g0412 02 2392493 2398829 ECH
Lele02g0412 02 2392493 2398829 Lele03g0430 03 2438079 2439276 hybridization
Lele02g0412 02 2392493 2398829 Lele04g0420 04 2488547 2489758 hybridization